| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2794 |
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| Symbol | |
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| ID | 8089615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 3263571 |
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| End bp | 3264911 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644836866 |
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| Product | ATP-dependent RNA helicase SrmB |
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| Protein accession | YP_002988393 |
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| Protein GI | 242240212 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.228355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCAA CCAATTTTTC CGAGTTTGAC CTTGATGAAA GCCTGCTTGA GGCCCTGAAT
GATATGGGTT TCAAGCGTCC GACAGCCATT CAGGCGGCGG CGATTCCCCC GGCGATGGAT
GGCAGGGACA TACTGGGATC CGCTCCGACC GGCACAGGTA AAACAGCCGC TTACTTGCTG
CCAGCCTTGC AACATCTGCT GGATTTTCCT CGCAAAAAAT CAGGGCCGCC TCGTATCCTG
ATCCTGACGC CGACACGGGA ACTGGCCATG CAGGTTGCTG ATCAGGCGCG TACATTAGCG
GCTCATACCC ATCTGGATAT CGCCACGATC ACCGGCGGTG TCGCCTACAT GAACCATGCT
GAAGTCTTCA GCGAAAATCA GGACGTCGTC GTCGCAACCA CCGGGCGTCT GTTGCAGTAC
ATCAAAGAAG AAAACTTCGA CTGCCGGGCA GTGGAAACGT TAATTCTGGA TGAAGCCGAC
CGCATGCTGG ATATGGGATT CGCCCAGGAC ATCGAACATA TCGCCGGAGA AACCCGCTGG
CGCAAACAAA CGTTGCTGTT CTCCGCTACG CTGGAAGGCA ACGCGGTTCA GGATTTCGCC
GAACGGTTGC TCAACGAACC GGTTTCTGTT GAAGCGGATC CCTCACGCCG GGAACGGAAA
AAAATACAGC AATGGTACTA CCGGGCAGAC AATATCGAGC ATAAGACGGC GCTGCTGTGC
CATTTGCTTC GCCAACCCGA TGTGACCCGC TCCATTATTT TCGTTCGCAA ACGCGAGCGC
GTGCATGAGC TGGTCGATTG GCTTCGCCAG GCTGGTATCG ACGCCTGCTA TCTGGAAGGC
GAAATGGTGC AGGCCAAACG CAACGAGGCG ATTACCCGTT TGAGCAACGG CCGGGTAAAC
GTACTGGTGG CAACCGATGT GGCGGCCCGG GGGCTGGATA TTTTGGATAT TAGCCATGTC
TTCAACTTCG ATATGCCGCG TACTGCCGAT ATTTATTTGC ACCGCATCGG GCGTACCGGA
CGAGCAGGTC GCAAAGGATG CGCCATCTCA CTGGTAGAAG CTCACGATCA TCTGCTGCTC
GGAAAAGTCA GCCGTTATCT GAACGAACCG CTCAAAATGC GCGTTGTCGA GGAACTACGG
CCAACGACGC GCGCGCCTAG CGAAAAGTCC ACGGGGAAAC CCTCGAAGAA GGCCCTGGCC
AAACGTAAAG AGCAAAAAGA GAAAGAAAAA GAGAAGCAAA AAGTCAAAGT CAAGGTTCGG
CATCGCGATC GCAAAAATAT CGGCAAACGC CGTCAACCAA GCGCGCCGAC GGACAAACCA
GCCGACAGTG GCGAACAGTA A
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| Protein sequence | MTATNFSEFD LDESLLEALN DMGFKRPTAI QAAAIPPAMD GRDILGSAPT GTGKTAAYLL
PALQHLLDFP RKKSGPPRIL ILTPTRELAM QVADQARTLA AHTHLDIATI TGGVAYMNHA
EVFSENQDVV VATTGRLLQY IKEENFDCRA VETLILDEAD RMLDMGFAQD IEHIAGETRW
RKQTLLFSAT LEGNAVQDFA ERLLNEPVSV EADPSRRERK KIQQWYYRAD NIEHKTALLC
HLLRQPDVTR SIIFVRKRER VHELVDWLRQ AGIDACYLEG EMVQAKRNEA ITRLSNGRVN
VLVATDVAAR GLDILDISHV FNFDMPRTAD IYLHRIGRTG RAGRKGCAIS LVEAHDHLLL
GKVSRYLNEP LKMRVVEELR PTTRAPSEKS TGKPSKKALA KRKEQKEKEK EKQKVKVKVR
HRDRKNIGKR RQPSAPTDKP ADSGEQ
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