| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2789 |
|---|
| Symbol | |
|---|
| ID | 8089610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3258393 |
|---|
| End bp | 3259349 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644836861 |
|---|
| Product | sigma E regulatory protein, MucB/RseB |
|---|
| Protein accession | YP_002988388 |
|---|
| Protein GI | 242240207 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3026] Negative regulator of sigma E activity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0807908 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTT TTTGGTTTGC CGCAAGTGTA TTGCTGGGAA GCCTGTCTTA TTCCTCCTTC
GCCCCGGCGC AAAGCGATAC CGGGGCGTTG TTGCAGCAGA TGGGCAGCGC CAGTCGATCT
TTGAATTATG AAATCCACTT CATCAACGTT TCCCGACAGG GAATCGAATC GTTGCGTTAT
CGCCATATTA TCGACGGGAA GGACACCTTG GCGGAGCTGG TTCATTTGGA CGGCCCTCGG
CGAGCTGTTG TTCAAAAAGG TCATGAAATC AGTTATTTCG AATCAGATTC CGAGCCTTTT
ACTTTGTCTG GCGATCACAT TGTCGATGCG TTGCCTTCGC TGATTTTTGC TAATTTCGAT
CGGTTATCGA CATATTACGA TTTCATCCCA ACCGGGCGTA TTCGCCTGGC CGATCGGCAA
GGTGATGTGA TTCGGGTTGT ATCCCGTGAT GGTACCCGTT TCAGCTATGT TGTCTGCCTG
GATTCCGAGT CTCATTTACC ATTGCGGGTC GATTTGCTCG ATCAAAACGG CGAACTGTTG
GAACAGTTCC GTATTGTTTC TCTTTCGTTT GATGACCATG AGGTTCAGTC GGCGGTAAAA
CCGCTGGATA GTCTGAGTTT ACCGCCGCCG GTGAATATCC CGGCCGGGAC TACGGCGAAT
TTCAGCTGGA TTAGCGAGTG GCTACCGGCG GGGGTTGAAG AGATATCCCG CAGCCAAAGA
ACATTGCCCG GCGTCAACGG CGTGGTGGAG TCGCGACTAT ATAGCGACGG TCTGTTTAGC
TTTTCTGTCA ATATCAGCCC GGTTGGCGAG AAACACCCTG ATCAAAATGC GTTGCTGGGG
CGTAAAGCCA TTCATACCGA GGTTCGCAAT GAGCACGAGA TTACTGTGAT TGGCGAGTTG
CCGCTGGCGA CGGCGAGACG GATCGCCGAT AACGTGATAT TCAAGGCATC ACAATGA
|
|---|
| Protein sequence | MKRFWFAASV LLGSLSYSSF APAQSDTGAL LQQMGSASRS LNYEIHFINV SRQGIESLRY
RHIIDGKDTL AELVHLDGPR RAVVQKGHEI SYFESDSEPF TLSGDHIVDA LPSLIFANFD
RLSTYYDFIP TGRIRLADRQ GDVIRVVSRD GTRFSYVVCL DSESHLPLRV DLLDQNGELL
EQFRIVSLSF DDHEVQSAVK PLDSLSLPPP VNIPAGTTAN FSWISEWLPA GVEEISRSQR
TLPGVNGVVE SRLYSDGLFS FSVNISPVGE KHPDQNALLG RKAIHTEVRN EHEITVIGEL
PLATARRIAD NVIFKASQ
|
|---|
| |