Gene Dd703_2785 details

Gene Information

• Locus tag: Dd703_2785
• Symbol: rnc
• ID: 8089606
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: -
• Start bp: 3254004
• End bp: 3254684
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644836857
• Product: ribonuclease III
• Protein accession: YP_002988384
• Protein GI: 242240203
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.40342
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCCCA TCCTCATAAA TCGCTTACAA AAAAAACTAG GTTATACTTT CCAACAATAC 
GATCTTTTAT TGCAGGCTCT GACCCATCGT AGCGCCAGCA GTAAACATAA TGAAAGGCTG 
GAATTTCTCG GAGATTCCAT TCTGAGTTTT GTGATCGCTA ATGCGTTATA TCATCGTTTT 
CCTCGCGTTG ATGAAGGCGA TATGAGCCGG ATGCGCGCTA CATTGGTTCG TGGCAATACG 
CTGGCGGAAA TTGCCCGGGA ATTTGAATTG GGCGAGTGTC TGCGGCTTGG GCCGGGAGAG 
TTGAAAAGCG GCGGTTTTCG TCGCGAATCC ATTCTGGCGG ATACCGTGGA AGCGTTGATT 
GGCGGTGTGT TCCTGGATAG TGATATTCAG GCGGTCGAAC GTCTGATTCT CAAATGGTAT 
CAGAGCCGTC TGGATGCCAT CAGTCCTGGA GATAAACAGA AAGATCCGAA AACCCGATTG 
CAAGAGTTTT TGCAAGGACG ACATCTTCCG CTGCCGACAT ATCTGGTGGT GCAGGTGCGG 
GGTGAAGCAC ACGATCAGGA ATTCACTATT CACTGCCAGG TTAGCGGTTT CAGCGAGCCG 
GTAGTGGGAA CCGGGTCAAG CCGTCGCAAA GCTGAACAGG CTGCGGCCGA ACAAGCGTTG 
AAAAAGCTGG AACTTGAATG A 

 

Protein sequence

MNPILINRLQ KKLGYTFQQY DLLLQALTHR SASSKHNERL EFLGDSILSF VIANALYHRF 
PRVDEGDMSR MRATLVRGNT LAEIAREFEL GECLRLGPGE LKSGGFRRES ILADTVEALI 
GGVFLDSDIQ AVERLILKWY QSRLDAISPG DKQKDPKTRL QEFLQGRHLP LPTYLVVQVR 
GEAHDQEFTI HCQVSGFSEP VVGTGSSRRK AEQAAAEQAL KKLELE