Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2755 |
Symbol | |
ID | 8089576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 3215839 |
End bp | 3216966 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644836827 |
Product | ABC transporter, substrate binding protein |
Protein accession | YP_002988354 |
Protein GI | 242240173 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000138231 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAAGAA ACACACTTCA TCGCTTATTG CTGGCTACAG CACTCACGAC GTCTTCGTTT ACCGTATTGG CTACACAGTA CCCGCTCACC GTCACCGATA TTGACGGACG AAGCGTCACG ATTAAACAGG AGCCGCAGCA TGTCGTGCTG CAGGACGGGC GTGACATCAT GGCGTTGGCC CTGCTTGATC GGGACAATCC GTTCACCCGT CTGGTTGCCT GGAATAACTT GCCGAAAAAA CAAGACACAG CGACTTGGGA ACTGCTCAAA GGCGCATGGC CGCAAGCCGA AAATATTATG GACATGGGCT TCGGCGACAA AGGCGATATC GAGCTGGAAA GCGTTCTGGC GAAAAAACCT GATCTGATGG TAGCCCAATT GCGCGCCAAA TCATCGCTGG AAACCAACGG CGTAGTCAGC AAGCTGCAAT CGTTGAACAT TCCACTACTG TTTGTAGATT ATGAAATCAA ACCGGCCCAG AATACCGCTC CCAGCATCGA CCTGCTCGGT AAAGTGCTGA ACCGCGAAGA TAATGCCAAA GCCTATACCG ATTTCTACCG CCAGCATTTT GACAACATCA TGAAAACCAC CGCTGGCATC AGCAACAAAC CCAAGGTGTT CATCGAACCC ATCGCCGGCA ATAGCGAAGC CTGCTGTTTC AGCCACGCCC ATAACGGCTG GGGCGGTCTA TTGGAAGCGA TCGGCGTAAA AAACATCGGC TCAGAACTGC TGCCAGGCGC AACTGGTTTT GTGTCACTGG AAAAAGTGAT CAGTGAGAAA CCAGAAGCTT ACATCATGAC CGGCTCCAAA CGCGGCAACG GCGCCAGCAA AATTCTGCCG TTCGGCTATG GCGCCAGCGC TGACGATATT AAAGCCAAAG CCAAAGAGCT GCTGAGCCGC CCTGGCATCG ATCAGATACC GGCGATTCAA GCGAAAAGGG TTTATGGCGT TTATCATCAT TTCTACAACC ATCCGTACAA CATCGTCGGG ATGGAATATC TGGCCAAGGC GATTTATCCG CAGCAATTTG CCGCGTTGAA CCCGGATGAG ACCTACCATC ACATCATCCG TCAGTTCACC AAACTGCCTG ATAACAACTT TATTTTTGCA CAGAAACTGG CTGAGTAA
|
Protein sequence | MLRNTLHRLL LATALTTSSF TVLATQYPLT VTDIDGRSVT IKQEPQHVVL QDGRDIMALA LLDRDNPFTR LVAWNNLPKK QDTATWELLK GAWPQAENIM DMGFGDKGDI ELESVLAKKP DLMVAQLRAK SSLETNGVVS KLQSLNIPLL FVDYEIKPAQ NTAPSIDLLG KVLNREDNAK AYTDFYRQHF DNIMKTTAGI SNKPKVFIEP IAGNSEACCF SHAHNGWGGL LEAIGVKNIG SELLPGATGF VSLEKVISEK PEAYIMTGSK RGNGASKILP FGYGASADDI KAKAKELLSR PGIDQIPAIQ AKRVYGVYHH FYNHPYNIVG MEYLAKAIYP QQFAALNPDE TYHHIIRQFT KLPDNNFIFA QKLAE
|
| |