| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2751 |
|---|
| Symbol | |
|---|
| ID | 8089572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3212106 |
|---|
| End bp | 3213320 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644836823 |
|---|
| Product | cysteine desulfurase |
|---|
| Protein accession | YP_002988350 |
|---|
| Protein GI | 242240169 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.173578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTAC CGATTTATCT CGATTATTCA GCAACAACGC CGGTTGATCC GCGCGTGGCT
GAGAAAATGA TGCAGTTTCT GACGCTGGAT GGCACTTTTG GCAATCCGGC TTCTCGTTCT
CACCGTTTTG GCTGGCAAGC GGAAGAAGCG GTAGATATTG CACGTAATCA AATCGCCGAA
TTGGTAGGTG CAGATCCCAG AGAGATCGTT TTCACCTCTG GCGCCACTGA ATCCGACAAC
CTGGCTATCA AAGGTGCAGC TAATTTCTAT CAGAAAAAAG GCAAGCACAT TATTACCAGC
AAAACAGAAC ATAAAGCTGT GCTGGATACT TGCCGTCAGT TGGAGCGTGA AGGTTTTGAC
GTGACCTATC TCGCACCTCA GCGCAATGGC ATCATTGATC TGCACGAGCT GGAATCGGCA
ATGCGCGATG ACACTATTCT GGTGTCCATC ATGCACGTCA ACAATGAAAT CGGCGTGGTG
CAGGACATTG CCACAATCGG TGAGATGTGC CGTAGCCGCG GAATCATTTT TCATGTCGAC
GCAACCCAAA GCGTCGGCAA ATTGCCGATC GATCTTGGCG TGCTCAAGGT TGATCTGATG
TCTTTCTCCG GGCACAAAAT CTATGGCCCG AAAGGTATTG GCGCGCTGTA TGTTCGTCGC
AAACCGCGTG TGCGTATCGA GGCGCAGATG CATGGCGGTG GTCATGAGCG AGGCATGCGT
TCCGGTACGT TGCCTGTTCA CCAGATTGTC GGTATGGGTG AAGCCTACCG CATCGCCAAA
GAAGAAATGG CGGCAGAGTC GGTGCGTTTA CGCTCATTGC GTGACCGTTT GTGGAACGGC
ATCAAAAATA TCGAAGAAGT GTATTTGAAT GGCGATCTGG AGCAAGGGGC GCCGAATATT
CTTAATGTCA GCTTCAACTA TGTTGAAGGC GAGTCACTGA TCATGTCTCT CAAGGATCTG
GCGGTTTCTT CCGGTTCAGC CTGTACGTCG GCCAGCCTTG AGCCATCTTA TGTGCTGCGT
GCGTTAGGGA TGAATGATGA ACTGGCCCAT AGTTCCATCC GTTTCTCGCT GGGGCGTTTT
ACTACCGAAG AAGAAATCGA CTACACCATT GATCTGGTAC GCAAATCCAT TGGCCGCCTG
CGCGAACTTT CTCCGTTATG GGAAATGTTC AAGGACGGTG TGGATATCAG CAGCATCGAA
TGGGCGCATC ATTAA
|
|---|
| Protein sequence | MKLPIYLDYS ATTPVDPRVA EKMMQFLTLD GTFGNPASRS HRFGWQAEEA VDIARNQIAE
LVGADPREIV FTSGATESDN LAIKGAANFY QKKGKHIITS KTEHKAVLDT CRQLEREGFD
VTYLAPQRNG IIDLHELESA MRDDTILVSI MHVNNEIGVV QDIATIGEMC RSRGIIFHVD
ATQSVGKLPI DLGVLKVDLM SFSGHKIYGP KGIGALYVRR KPRVRIEAQM HGGGHERGMR
SGTLPVHQIV GMGEAYRIAK EEMAAESVRL RSLRDRLWNG IKNIEEVYLN GDLEQGAPNI
LNVSFNYVEG ESLIMSLKDL AVSSGSACTS ASLEPSYVLR ALGMNDELAH SSIRFSLGRF
TTEEEIDYTI DLVRKSIGRL RELSPLWEMF KDGVDISSIE WAHH
|
|---|
| |