| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2739 |
|---|
| Symbol | |
|---|
| ID | 8089560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3201701 |
|---|
| End bp | 3202447 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644836811 |
|---|
| Product | type IV pilus biogenesis/stability protein PilW |
|---|
| Protein accession | YP_002988338 |
|---|
| Protein GI | 242240157 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3063] Tfp pilus assembly protein PilF |
|---|
| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGGA TATATGGGCG GCTGTGGGCC GCTGTTGTCG TGTTGCTTGC GGGGTGCACC
CATTCGCCGC CGCAGACAGC CGCAACGGCG CTGTCACAAA CGCGACTCCA GCTCGGAATG
GAGTATCTGG CTCGTAATAA TCTGGCGGCG GCGCGGGATA ATCTGCAGAA GGCGGAGCAG
GTCGCGCCGG ACGATTATCG AATTCAACTG GGCATGGCGC TTTACGAGCG GCGAATTGGC
GAGAATCAGG CCGCAGAGCG GCGTTATCGG CACTTGCTGC AACGGATGCC TGAGAATGGC
AGCGTCCTGA ATAATTACGG TGCGTTTCTC TGTAGTTTAG GGCAGTATGT TGAAGCGCAG
AGGCAGTTCG TCGCTGTATT GCAACTTTCT GATTACAATC AGGTTGCTGA GGCGACTGAG
AATGCAGGAT ACTGCTTCCT CAATGCCGGC CATCCTGATG AGGCCCGCAG GTGGCTCGGC
CAGGCGCTAA AGCGTGATCC GTCAAAAGGC ACCCGGTTGT TGGCTGAAGC GGAAAGCCGA
CTCGACGCCG GGCAACACGA GCAGGCGCTA CTGCTCTTGA AGGTTTATCA GGCTGGGCTT
TCGGCTACCG AAGAAAGTCT ATGGCTGCAA ATCCGTTTCG CCGCGCTGGC GAATCATCAT
GACGAGGTAA AACGTTATGG CGCATTGCTG GCGCGAAGTT TTCCACAATC CAAACAGTAC
CAGCAGTTTT TAGCTAATGA ATACTGA
|
|---|
| Protein sequence | MKGIYGRLWA AVVVLLAGCT HSPPQTAATA LSQTRLQLGM EYLARNNLAA ARDNLQKAEQ
VAPDDYRIQL GMALYERRIG ENQAAERRYR HLLQRMPENG SVLNNYGAFL CSLGQYVEAQ
RQFVAVLQLS DYNQVAEATE NAGYCFLNAG HPDEARRWLG QALKRDPSKG TRLLAEAESR
LDAGQHEQAL LLLKVYQAGL SATEESLWLQ IRFAALANHH DEVKRYGALL ARSFPQSKQY
QQFLANEY
|
|---|
| |