| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2649 |
|---|
| Symbol | |
|---|
| ID | 8088335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3101727 |
|---|
| End bp | 3102509 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644836720 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002988248 |
|---|
| Protein GI | 242240067 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.13027 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAA CGGCCCCTAT TACCTTGTCG ATGATTGATA TCCACAAGTC GTTCGGCGCG
CTGGAGGTGT TGAAGGGCAT CTCGCTGGAT GCGCGCCAGG GCGAGGTTAT TTCGCTGCTG
GGCGCCAGCG GGTCAGGCAA GAGTACCTTT TTGCGTTGCA TCAATCTGCT GGAAACGCCG
GATTCGGGGA CGGTGGCGGT CAGCGGCGAG ATGATCACCA TGAAGCGGCA TAAGCACGGC
CATCAGATCG CGGCCGATCG CCAGCAGGTA GAACGTTTAC GTACTCGACT GGGCATGGTG
TTTCAGAATT TCAATCTGTG GAGCCACATG ACGGTACTGC AGAATGTGAT TGAAGGCCCT
TTGCACATAT TGAAACGTTC CCGTGCGGAG TGTATTGAAC GAGCGGACGC GCTGTTGGCG
AAGGTTGGGT TGTACGAGCG GCGGGATTTT TATCCGGTTC AACTCTCCGG CGGCCAGCAA
CAGCGGGTGG CGATCGCCCG GGCGTTGTCG ATGGAACCGG AGGTGATGTT GTTCGATGAA
CCGACTTCAG CGCTGGATCC GGAACTGGTG GGGGAGGTGC TTAAAGTGAT GCGTGGGCTG
GCTGAAGAAG GGCGCACCAT GCTGGTGGTG ACGCATGAGA TGGGGTTCGC CCGCCATGTG
TCGAACCGGG TAGTGTTCAT GCAGCAAGGG CGCATTGACT GTGAAGGCTC CCCTGACGCC
ATGTTCGGCG GCGAGAGTTC GCCGCGTTTT CAGCAATTTA TCGCCAGTCA CCGGGTGGTG
TAG
|
|---|
| Protein sequence | MSKTAPITLS MIDIHKSFGA LEVLKGISLD ARQGEVISLL GASGSGKSTF LRCINLLETP
DSGTVAVSGE MITMKRHKHG HQIAADRQQV ERLRTRLGMV FQNFNLWSHM TVLQNVIEGP
LHILKRSRAE CIERADALLA KVGLYERRDF YPVQLSGGQQ QRVAIARALS MEPEVMLFDE
PTSALDPELV GEVLKVMRGL AEEGRTMLVV THEMGFARHV SNRVVFMQQG RIDCEGSPDA
MFGGESSPRF QQFIASHRVV
|
|---|
| |