Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2642 |
Symbol | |
ID | 8088328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 3093834 |
End bp | 3095390 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644836713 |
Product | histidine ammonia-lyase |
Protein accession | YP_002988241 |
Protein GI | 242240060 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.459699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCACA TCCCAAGTTA TTGCCTGACG CCCGGCGCGG TGGATCTCGC CACGCTGCGC GCCATTTACC ACGGCAATGT CACGCTGACG CTGGCGGAGC CGGCGCGCGC CGCCATTGAG GCCGCGCAGG AGACGGTGCA AAACATCGTG GCGCAGGGCC GGGTGGTCTA CGGCATCAAT ACCGGTTTCG GCAAGCTGGC GCAAACGCGC ATTCCGGCGG ATCGGCTGGC GGAACTGCAA CGCAATCTGG TGCTATCGCA CAGCGTGGGG GTCGGCGAAC TGTTGCCGGA CGATGTGCTG CGTTTGGTGA TGGCGACCAA GGTGGTCAGT TTGGCGCGCG GGCACTCCGG GGTACGGATG CGGGTGATTG ACACGCTGCT GGCGCTGTTC AACGCCGGAG TGATGCCCTG CGTACCGGAA AAGGGCTCGG TGGGCGCATC CGGCGATCTG GCGCCGCTGG CGCATTTGTC GCTGATGCTG CTGGGGGAAG GCCAGGTACG GGTCAATGGC GCGCTGATCC CGGCGCGGGA TGGGCTGGCG CTGGCCGGCG TCGAGCCGTT AGTGCTGGGG CCGAAAGAGG GGCTGGCGCT GCTTAACGGT ACGCAGGTTT CCACCTCGCT GGCGCTGCGC GGGTTGTTCG AAGCGGAAAA CGTGTTTGCC GCCGGTCTGG TGGCGGGCGC GTTGTCGCTG GAAGCCATCA AAGGGTCGGT CAAACCGTTT GACGCCCGTA TCCATCAGGC GCGCGGCCAG GCCGGGCAGA TCGCCGTGGC GGCTGCCGTC AGCGAGCTGT TGGCGGACAG CGAAATATTA CAGTCGCATG TGAATTGCGG CCGGGTGCAG GATCCCTATT CCATCCGTTG CGTGCCGCAG GTGATGGGCG CCTGCCTCGA CAACCTTAAC CACGCCGCAC GCATTTTGCA GATCGAGGCG AATGCCGCCT CTGATAACCC GCTGGTTTTC CCGGAAACGG AAGAAGTGAT TTCCGGCGGT AACTTCCACG CCGAACCGGT GGCGTTCGCG GCGGATATTA TCGCGCTGGC CGTCGCGGAA ATCGGCGCCA TTTCCGAGCG CCGCATGGCG CTGCTGCTGG ACAGCGCGCT GTCCGGCCTG CCGCCGTTTC TGGTGAACGA CGGCGGCGTC AACTCCGGAT TCATGATTGC ACAGGTCACT GCCGCCGCGC TGGCGTCGGA GAACAAATCG CTGGCTCATC CCGGCAGCGT GGACAGCCTG CCGACGTCCG CCAATCAGGA AGACCATGTC TCGATGGCGA CCTACGCCGC CCGCCGTCTC GGCAGCATGT GCTTCAACAC CGCCACCGTC GTAGGCATCG AGGCGATGGC CGCCGCGCAG GGCATCGATT TTCACCGGCC GCTGAAGAGC TCGCCGCTGC TGGAGCAGGA ATTGCTGCAA CTGCGGGAGC GGGTGGCGTT TCTTGATAGC GATCGCCTGA TGGCGACGGA TATTGAACGG ATGCGTCAGT GGGCCGGCAG CGGCCGTTGG CCGACGCCTA TCTTCACCTT GTTACCCAGT TATGCCGCTG TAGCGGCGCA CGCCTGA
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Protein sequence | MSHIPSYCLT PGAVDLATLR AIYHGNVTLT LAEPARAAIE AAQETVQNIV AQGRVVYGIN TGFGKLAQTR IPADRLAELQ RNLVLSHSVG VGELLPDDVL RLVMATKVVS LARGHSGVRM RVIDTLLALF NAGVMPCVPE KGSVGASGDL APLAHLSLML LGEGQVRVNG ALIPARDGLA LAGVEPLVLG PKEGLALLNG TQVSTSLALR GLFEAENVFA AGLVAGALSL EAIKGSVKPF DARIHQARGQ AGQIAVAAAV SELLADSEIL QSHVNCGRVQ DPYSIRCVPQ VMGACLDNLN HAARILQIEA NAASDNPLVF PETEEVISGG NFHAEPVAFA ADIIALAVAE IGAISERRMA LLLDSALSGL PPFLVNDGGV NSGFMIAQVT AAALASENKS LAHPGSVDSL PTSANQEDHV SMATYAARRL GSMCFNTATV VGIEAMAAAQ GIDFHRPLKS SPLLEQELLQ LRERVAFLDS DRLMATDIER MRQWAGSGRW PTPIFTLLPS YAAVAAHA
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