| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2580 |
|---|
| Symbol | |
|---|
| ID | 8086970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3025261 |
|---|
| End bp | 3025956 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644836650 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002988179 |
|---|
| Protein GI | 242239998 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAACG AGACAACGGC GATGCGACTA TTACTGGTTG AAGATCATGA TGAACTGGCC
CATTGGCTGG AGAAAGCGCT TAGCGAGTCC GGCTTTGCTG TGGATCGTGC CGGCGATGGC
ATGACGGCGG AGCAGTTGCT GCAGCTCGAG ACCTATACGC TGATGGTGCT TGATGTCTCG
TTACCGAAAA TGGATGGTTT TTCTGTGCTG GCGCGCTTAC GAAAGCGGGG GCAAAACCTG
CCGGTCTTGT TGTTGACGGC GCGCACCGAC GTCGCGGATC GGGTGCGGGG GCTGAATCTG
GGGGCGGATG ACTATCTGGC CAAGCCGTTC GATGTGGCTG AACTGGAAGC CCGACTGCGG
GCCTTATTGC GACGTAGTCA GGGGTTAGCG CAGTCTGTCC AGCATTTTGG CGACTTGAGC
TGGCATGATG AGGGGTATTT TTTGCTGTGG GGGAAACCGT TGGCATTGAC GCCGCGAGAG
CAGGCTGTGT TGCATACCCT GATGCAACGA CGAGGGCGGC CGGTGTTGCG TCAGTATCTG
TATGAACAGG TCTTTACGTT TTTGGATGAC GTCAGTATCG ATAGCCTGGA TCTGTATGTT
CATCGGGTGC GGAAAAAACT GGCTGGCAGC AATGTGGCGA TCGTCACCCT GAGGGGGTTG
GGGTACAGCC TGGAGTGCGA ACATGCCAAA GGTTGA
|
|---|
| Protein sequence | MDNETTAMRL LLVEDHDELA HWLEKALSES GFAVDRAGDG MTAEQLLQLE TYTLMVLDVS
LPKMDGFSVL ARLRKRGQNL PVLLLTARTD VADRVRGLNL GADDYLAKPF DVAELEARLR
ALLRRSQGLA QSVQHFGDLS WHDEGYFLLW GKPLALTPRE QAVLHTLMQR RGRPVLRQYL
YEQVFTFLDD VSIDSLDLYV HRVRKKLAGS NVAIVTLRGL GYSLECEHAK G
|
|---|
| |