Gene Dd703_2553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2553 
Symbol 
ID8086943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2997244 
End bp2998458 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content52% 
IMG OID644836623 
Productaminotransferase AlaT 
Protein accessionYP_002988152 
Protein GI242239971 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCCAA TAGAAAAATC GAAAAAACTT GAAAATGTCT GTTATGACAT CCGCGGCCCG 
GTACTCAAAG AAGCCAAACG ACTGGAAGAA GAAGGAAACA AGGTTCTTAA ACTTAATATC
GGCAACCCGG CGCCATTCGG TTTTGATGCA CCGGATGAAA TTCTGGTCGA CGTTATTCGT
AACCTGCCGA CAGCGCAAGG ATACTGCGAC TCCAAAGGCC TGTACTCCGC CCGTAAAGCC
ATCGTCCAGC ACTATCAAGC GCGCGGCATG CGCGATATCA CTCTTGAAGA TGTGTATATC
GGCAATGGCG TATCCGAGCT GATCGTCCAG TCCATGCAGG CCCTGCTGGA TGATAATGAT
GAGATGCTGG TGCCAGCACC AGATTATCCG CTCTGGACCG CAGCGGTCTC ATTATCCGGC
GGCAACGCCG TGCATTACCG TTGCGACGAA GAGGCGGGTT GGTTTCCGGA TCTGGATGAT
ATTCGCAAAA AAATCACCCC TAATACCCGC GGTATCGTCA TCATCAACCC GAATAACCCG
ACTGGGGCGG TTTACAGCAA AGAATTACTG CTGGAGATCG TTGAATTAGC GCGCCAGCAT
AGTCTGATCA TTTTCGCTGA CGAAATTTAC GACAAGATTC TTTACGACGA AGCACAACAC
CACTCCATCG CCGCATTGGC GCCGGACCTG CTGACAGTGA CGTTCAACGG CCTGTCCAAA
ACCTATCGCG TAGCCGGTTT TCGTCAAGGG TGGATGGTAC TCAATGGCCC GAAAAAACAT
GCCCGTGGGT ACATTGAAGG GTTGGAGATG CTGGCATCAA TGCGTCTGTG CGCCAATGTC
CCCATGCAGC ACGCGATCCA GACGGCGTTA GGCGGTTATC AAAGTATCAG CGAATTCATC
CATCCCGGCG GCCGCCTGTA TGAGCAACGA AACCGCGCCT GGGAGCTGAT TAACCAAATC
CCCGGCGTTT CATGCGTCAA ACCCAGCGGC GCGCTCTATA TGTTCCCGCG TATTGATGCC
AAACGCTTCA ACATTCATGA CGACCAAAAA CTGGTGCTGG ATCTCTTGCT TCAGGAAAAG
GTTCTGCTGG TTCAAGGCAC CGCGTTCAAC TGGCCGGAGC CGGATCATGT ACGTATTGTA
ACGCTGCCGC GTGTTGATGA CCTGGAAATG GCCGTCAGCA AACTGGGGCG ATTCCTGGGA
CACTATCATC AGTAA
 
Protein sequence
MSPIEKSKKL ENVCYDIRGP VLKEAKRLEE EGNKVLKLNI GNPAPFGFDA PDEILVDVIR 
NLPTAQGYCD SKGLYSARKA IVQHYQARGM RDITLEDVYI GNGVSELIVQ SMQALLDDND
EMLVPAPDYP LWTAAVSLSG GNAVHYRCDE EAGWFPDLDD IRKKITPNTR GIVIINPNNP
TGAVYSKELL LEIVELARQH SLIIFADEIY DKILYDEAQH HSIAALAPDL LTVTFNGLSK
TYRVAGFRQG WMVLNGPKKH ARGYIEGLEM LASMRLCANV PMQHAIQTAL GGYQSISEFI
HPGGRLYEQR NRAWELINQI PGVSCVKPSG ALYMFPRIDA KRFNIHDDQK LVLDLLLQEK
VLLVQGTAFN WPEPDHVRIV TLPRVDDLEM AVSKLGRFLG HYHQ