Gene Dd703_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2546 
Symbol 
ID8086936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2989400 
End bp2990749 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content58% 
IMG OID644836616 
ProductNADH dehydrogenase I subunit F 
Protein accessionYP_002988145 
Protein GI242239964 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 
TIGRFAM ID[TIGR01959] NADH-quinone oxidoreductase, F subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.698943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAA ACATTGTTCT GACGGCTGAA CAGCATCCTC TGACGTGGCG TCTGCGTGCT 
GACGAGCAGC CGGTGTGGCT GGATGAATAT TGCAGCAAGA ACGGTTATGC CGGCGCCCGC
AAGGCACTGA CCGGTATGTC CCAGGATGAA GTGGTGACGC TGGTCAAGGA CGCCGGGCTG
CGCGGCCGCG GCGGCGCAGG CTTTTCCACC GGGCTCAAAT GGAGCCTGAT GCCGAAAGAT
GAAAGCATGA ATATCCGCTA CCTGCTGTGC AATGCGGATG AAATGGAGCC AGGCACCTAT
AAAGATCGCT TGCTGATGGA GCAAATGCCG CATCTGCTGA TCGAAGGCAT GGTGATCGGC
GCCTATGCGC TGAAAGCCTA TCGCGGCTAC ATCTTTCTGC GCGGCGAGTA TATCGAGGCT
GCCGCTAACC TGCGTCGCGC GATAGAGGAA GCCAAGGCGG CGGGGTTGCT CGGTAAGAAT
ATCCTGGGTA CCGGGTTTGA TTTTGAACTG TTCGTTCATA CCGGCGCCGG GCGTTACATC
TGTGGTGAAG AAACCGCACT GATCAACTCG CTGGAAGGGC GTCGCGCCAA TCCGCGTTCG
AAGCCGCCGT TTCCCGCGAT GGCCGGAGCC TGGGGCAAAC CGACCTGCGT CAACAATGTG
GAAACCCTGT GCAATGTGCC GGCCATCGTG GAGCATGGTA TTGAGTGGTA TCAGGGGTTG
TCGGCCGGTA AGAGCAAGGA TGCCGGTACC AAATTAATGG GATTCTCCGG CCGGGTGAAA
AATCCGGGCT TGTGGGAACT GCCGTTCGGC ACCACCGCCC GTGAAATTCT TGAGGACTAC
GCCGGCGGTA TGCGCGATGG TCTGAAACTC AAAGCCTGGC AACCGGGCGG CGCGGGAACT
GACTTTCTGA CCGATGCGCA TCTGGATTTG CCGATGGATT TTGAAAATAT CGGCAAAGCA
GGAAGCCGTT TGGGCACCGC GCTGGCGATG GCCGTCGACA ATGAAATCAA CATGGTGTCG
TTGACGCGCA ATCTGGAAGA GTTTTTTGCC CGCGAGTCGT GCGGCTGGTG TACGCCATGC
CGTGACGGAT TGCCGTGGAG CGTAAAACTG TTGCGTGCTC TGGAGCGAGG GGAAGGGCAG
CCGGGGGATA TCGAAACGCT GGAGCAGATT TGTCGTTATC TCGCGCCGGG CAATACCTTC
TGCGCGCATG CGCCGGGTGC CGTCGAACCA CTGCAGAGCG CCATCAAATA TTTCCGGGAT
GAATTCGAAG CCGGTATCGC CAGACAGGCG CCCGGCAATA CCAAAGATAT TCGCGGCATT
CAGCCAAACC TGCTGAAACA GCGCTGGTAA
 
Protein sequence
MTKNIVLTAE QHPLTWRLRA DEQPVWLDEY CSKNGYAGAR KALTGMSQDE VVTLVKDAGL 
RGRGGAGFST GLKWSLMPKD ESMNIRYLLC NADEMEPGTY KDRLLMEQMP HLLIEGMVIG
AYALKAYRGY IFLRGEYIEA AANLRRAIEE AKAAGLLGKN ILGTGFDFEL FVHTGAGRYI
CGEETALINS LEGRRANPRS KPPFPAMAGA WGKPTCVNNV ETLCNVPAIV EHGIEWYQGL
SAGKSKDAGT KLMGFSGRVK NPGLWELPFG TTAREILEDY AGGMRDGLKL KAWQPGGAGT
DFLTDAHLDL PMDFENIGKA GSRLGTALAM AVDNEINMVS LTRNLEEFFA RESCGWCTPC
RDGLPWSVKL LRALERGEGQ PGDIETLEQI CRYLAPGNTF CAHAPGAVEP LQSAIKYFRD
EFEAGIARQA PGNTKDIRGI QPNLLKQRW