| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2542 |
|---|
| Symbol | |
|---|
| ID | 8086932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 2984491 |
|---|
| End bp | 2985036 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644836612 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_002988141 |
|---|
| Protein GI | 242239960 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCG CGTTTTATGC GACTGCGATT ATTGCGGTAC TGGCAACATT GCGTGTCATT
ACCCATACCA ATCCAGTACA TGCATTACTG TATCTGATTA TCTCGTTACT GGCGGTGGCT
GGTGTGTTCT TCTCTCTCGG TGCGTATTTC GCCGGCGCGT TGGAGATTAT TGTGTATGCC
GGCGCCATTA TGGTGCTGTT TGTCTTCGTG GTGATGATGC TGAACCTCGG CCACTCGGTA
GTGGATCAGG AGAAAGCCTG GTTGAAACCG GGTGTGTGGA TCGGGCCCGG CATCCTGTCG
CTGGTATTGT TGGGCGTCAT TATCAAGGGG ATCTTCCGCC TGAACGGCCA GGATATCTCC
GGCGGAATGA TTGACGCCAA GGCGGTGGGC ATCAGCCTGT TCGGTCCGTA TGTTCTGGCT
GTGGAGTTGG CATCCATGTT GTTGCTGGCC GGTCTGGTGG TGGCGTTCCA CATCGGGCGT
GAAGATAAGC GCGGCGGTGA CGTTCTTGCC AAAGATGACA AAAAATCAAC GGAGGAACGC
GCATGA
|
|---|
| Protein sequence | MEFAFYATAI IAVLATLRVI THTNPVHALL YLIISLLAVA GVFFSLGAYF AGALEIIVYA
GAIMVLFVFV VMMLNLGHSV VDQEKAWLKP GVWIGPGILS LVLLGVIIKG IFRLNGQDIS
GGMIDAKAVG ISLFGPYVLA VELASMLLLA GLVVAFHIGR EDKRGGDVLA KDDKKSTEER
A
|
|---|
| |