| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2540 |
|---|
| Symbol | |
|---|
| ID | 8086930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 2982345 |
|---|
| End bp | 2984195 |
|---|
| Gene Length | 1851 bp |
|---|
| Protein Length | 616 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644836610 |
|---|
| Product | NADH dehydrogenase subunit L |
|---|
| Protein accession | YP_002988139 |
|---|
| Protein GI | 242239958 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTAC TCTATTTAAC TATTCTGTTT CCGCTACTCG GATTCTTATT GCTGGCTTTC
TCCCGCGGGC GTTGGTCGGA AAACCTGTCC GCCGCCATTG GTGTGGGCTC GGTCGGGTTG
GCTGCGTTGG TTGCCTGTAA CGCGGCGCTG GATTTTGCCG GCCAGCAGCA CGCAGGCGGC
GTGACTTTCT TCACTCAGCA TTTGTGGACC TGGATGACGG TCGGCAAGTT TGATATCAGC
GTGAATCTGG CGCTGGACGG GCTGTCGCTG ACGATGCTGT CCGTGGTGAC GGGCGTGGGT
TTCTTTATCC ACCTGTTCGC ATCCTGGTAT ATGCGTGGTG AAGAGGGGTA CTCCCGTTTC
TTTGCCTACA CCAATCTGTT CATCGCCAGT ATGGTGGTGC TGGTGCTGGC GGATAACCTG
CTGCTGATGT ATCTCGGTTG GGAAGGGGTG GGGCTGTGCA GTTATCTGCT GATCGGCTTC
TACTACACCA ATCCGAAGAA CGGTGCAGCG GCCATGAAAG CGTTTATTGT TACCCGTGTA
GGGGATGTAT TTCTGGCGTT TGCGCTGTTC ATCCTGTATC GCGAATTGGG GACATTGAAC
TTCCGCGAGC TGATGGTGCT GGCGCCGCAG TGTCTGGCCG AAGGGTCGCC GGTTATTACC
TGGGCAACCC TGATGTTGCT GGGCGGTGCG GTGGGTAAAT CGGCACAGTT GCCGTTGCAG
ACTTGGCTGG CCGACGCGAT GGCGGGCCCG ACCCCAGTTT CCGCGCTGAT CCATGCTGCG
ACGATGGTGA CTGCCGGCGT ATATTTGATA GCACGCACGC ACGGTCTGTT CCTGATGGCG
CCGGATGTGT TGAATCTGGT GGGTGTCGTT GGGGCTGTGA CCCTGTTGCT GGCTGGTTTC
GCTGCGCTGG TGCAAACCGA TATCAAGCGC GTGCTGGCGT ACTCCACCAT GAGCCAGATC
GGTTACATGT TTCTGGCGTT GGGCGTTCAG GCGTGGGATG CGGCGATCTT CCACCTGATG
ACCCATGCAT TCTTCAAGGC GCTGTTGTTC CTGTCATCCG GCTCGGTAAT TCTGGCCTGT
CACCATGAAC AGAACATCTT CAAGATGGGC GGTTTACGTA AGACAATTCC GTTGGTGTAT
GTGTGCTTCC TGGTTGGTGG TTCGGCGCTG GCGGCGCTGC CGCTGGTGAC GGCTGGTTTC
TTCAGTAAGG ATGAGATTCT GGCCGGCGCC TGGGCCAACG GTCATCTTAA TCTGGTAGTT
GCCGGTCTGG CCGGGGCGTT CATGACGTCG CTCTATACCT TCCGGATGAT TTTTATCGTG
TTCCATGGCG AAGAAAAAAC CAAGGCTCAC GCCGGCAAGG GGATCTCGCA TCATCTGCCG
CTGCTGGTGC TGATGGTGCT GTCCACCTTT GTGGGCGCCA TGATTGTGCC TCCTTTGCAT
GGCGTTCTGC CTGCGACCAC TGAATTGGAA CATGGGCAAG TCATGATGCT GGAAATCGCT
TCCGGCGTAG TGGCTATCGT CGGTATTTTG CTGGCCGCCG CACTGTGGCT TGGCAAGCGT
CAAACGGTCA ACGCGGTTGC TGACAGTGCG CCCGGGCGTT TCTTCTCTAC CTGGTGGTTC
CATGCCTGGG GCTTTGACTG GCTGTACGAC AAAGTTTTTG TCAAACCGTA TCTGGCTATC
GCGACGCTGT TGCAGCGAGA CCCGTTGAAT GCGCTGATGA ATATTCCAGC CATACTGGTT
CGCTGGGGCA ACCGTGCTTT GCTTGTCAGC GAGAACGGTC AATTGCGCTG GTATGTTGCC
TCAATGGGTG TTGGTGCCGT GGTGGTGCTG GCGCTGCTGT TGCTGGTATA G
|
|---|
| Protein sequence | MNLLYLTILF PLLGFLLLAF SRGRWSENLS AAIGVGSVGL AALVACNAAL DFAGQQHAGG
VTFFTQHLWT WMTVGKFDIS VNLALDGLSL TMLSVVTGVG FFIHLFASWY MRGEEGYSRF
FAYTNLFIAS MVVLVLADNL LLMYLGWEGV GLCSYLLIGF YYTNPKNGAA AMKAFIVTRV
GDVFLAFALF ILYRELGTLN FRELMVLAPQ CLAEGSPVIT WATLMLLGGA VGKSAQLPLQ
TWLADAMAGP TPVSALIHAA TMVTAGVYLI ARTHGLFLMA PDVLNLVGVV GAVTLLLAGF
AALVQTDIKR VLAYSTMSQI GYMFLALGVQ AWDAAIFHLM THAFFKALLF LSSGSVILAC
HHEQNIFKMG GLRKTIPLVY VCFLVGGSAL AALPLVTAGF FSKDEILAGA WANGHLNLVV
AGLAGAFMTS LYTFRMIFIV FHGEEKTKAH AGKGISHHLP LLVLMVLSTF VGAMIVPPLH
GVLPATTELE HGQVMMLEIA SGVVAIVGIL LAAALWLGKR QTVNAVADSA PGRFFSTWWF
HAWGFDWLYD KVFVKPYLAI ATLLQRDPLN ALMNIPAILV RWGNRALLVS ENGQLRWYVA
SMGVGAVVVL ALLLLV
|
|---|
| |