| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2539 |
|---|
| Symbol | |
|---|
| ID | 8086929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 2980712 |
|---|
| End bp | 2982247 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644836609 |
|---|
| Product | NADH dehydrogenase subunit M |
|---|
| Protein accession | YP_002988138 |
|---|
| Protein GI | 242239957 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTACTAC CTTGGCTGAT TCTTCTCCCC TTTATCGGCG GCCTGCTGTG TTGGCAGCTC
GAGCGTTTTG GCACGCGGGT GCCGCGCTGG ATCGCACTGA TCTCCATGGG GCTGACACTG
GTGCTGTCGT TGCAGTTGTG GCTGCAGGGC GGTTTCTCAC TGAGTACGCC GTCGGGGTTG
CCCCAATGGC AATCGGAGTA CAACCTGCCG TGGATACCGC GCTTTGGTAT CTCTACTCAT
CTGGCGCTGG ATGGGCTATC GCTATTGATG GTGGTGCTGA CCGGCCTGCT GGGTGTGTTG
GCTATTCTCT GTTCCTGGAA TGAAATCCAG CGTTATCAGG GCTTTTTCCA CCTGAATCTG
CTGTGGATCC TGGGCGGTGT TATCGGCGTA TTCCTGGCTA TCGACATGTT CCTGTTCTTC
TTCTTCTGGG AAATGATGTT GGTGCCGATG TACTTCCTGA TCGCGCTCTG GGGTCACAAA
GGATCGGATG GGAAAACTCG TATTGCGGCG GCCACCAAGT TCTTTATTTA TACGCAGGCC
AGCGGCCTGG TGATGTTGAT CTCCATTCTG GCGCTGGTGT TCGTGCATCA TAACGCTACC
GGCGAGTGGT CGTTCGATTA TCAACAGCTG TTGAAAACGC CGATGTCGTT CGGGCTTGAG
TATGCGCTGA TGCTGGGCTT CTTCGTCGCT TTCGCAGTAA AAATGCCGCT GGTGCCGCTG
CACGGCTGGC TGCCGGATGC CCATAGTCAG GCGCCGACGG CCGGTTCTGT GGATCTGGCC
GGTATTCTTC TGAAAACGGC GGCCTACGGC CTGCTGCGTT TCAGTCTGCC GCTGTTCCCG
AATGCGTCTC ATGCGTTTGC GCCGGTGGCG ATGTGGTTTG GCGTCATCGG TATTTTCTAC
GGTGCTTGGA TGGCGTTCAA ACAGACGGAT ATCAAACGCC TGATCGCCTA TACCTCGGTA
TCCCACATGG GGTTTGTGAT GATTGCCATC TACACCGGCA ATCAACTGGC CTATCAGGGT
GCGGTGGTGC AGATGATTGC ACACGGCCTG TCCGCCGCCG GGATGTTCAT CATCTGCGGC
CAGCTTTATG AACGCCTGCA CACGCGCGAT ATGCGTCAGA TGGGGGGGCT GTGGAGCCGA
ATCCGTTATC TGCCGGCGCT GTCGCTGTTC TTTGCCGTCG CAACGTTAGG TATGCCAGGC
ACCGGCAACT TTGTCGGCGA ATTCATGATT CTGTTCGGCA GTTACCAGAT CGTTCCGGTG
ATCACGGTGG TTTCCACTTT TGGGCTGGTA TTTGCCTCCG TTTATTCGCT GATCATGATG
CAGCGCGCGT TTTATGGCGC ACCCAAATCG GATGAAGCGT TGGCGGGCAT GTCGCCCCGT
GAGCTGTCGC TCATTCTGCT GCTGGTTGTT CTGTTGGTGC TGCTGGGTGT GTATCCGCAG
CCGATTCTGG ATACCTCCAG TGCGGCGATG ACCAATATCC AGCAATGGTT TACGTCATCG
ATTCAGGGTT CAACAATTTC AACGACAGGG CTGTAA
|
|---|
| Protein sequence | MLLPWLILLP FIGGLLCWQL ERFGTRVPRW IALISMGLTL VLSLQLWLQG GFSLSTPSGL
PQWQSEYNLP WIPRFGISTH LALDGLSLLM VVLTGLLGVL AILCSWNEIQ RYQGFFHLNL
LWILGGVIGV FLAIDMFLFF FFWEMMLVPM YFLIALWGHK GSDGKTRIAA ATKFFIYTQA
SGLVMLISIL ALVFVHHNAT GEWSFDYQQL LKTPMSFGLE YALMLGFFVA FAVKMPLVPL
HGWLPDAHSQ APTAGSVDLA GILLKTAAYG LLRFSLPLFP NASHAFAPVA MWFGVIGIFY
GAWMAFKQTD IKRLIAYTSV SHMGFVMIAI YTGNQLAYQG AVVQMIAHGL SAAGMFIICG
QLYERLHTRD MRQMGGLWSR IRYLPALSLF FAVATLGMPG TGNFVGEFMI LFGSYQIVPV
ITVVSTFGLV FASVYSLIMM QRAFYGAPKS DEALAGMSPR ELSLILLLVV LLVLLGVYPQ
PILDTSSAAM TNIQQWFTSS IQGSTISTTG L
|
|---|
| |