Gene Dd703_2533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2533 
Symbol 
ID8086923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2972988 
End bp2974004 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content61% 
IMG OID644836603 
Producthydrogenase 2 protein HybA 
Protein accessionYP_002988132 
Protein GI242239951 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.412002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACAGAC GCAATTTTTT CAAGCTGGCG TCCGCGGGAG CGCTGCTGGC GGGTACGCCG 
CTTGCCAGTC AGGCGGAGGC CACCAACCGG CCGCCGATCC CCGGTGCGCT CGGCATGCTG
TACGATTCGA CGCTGTGCGT GGGGTGCCAG GCGTGCGTGA CCAAATGCCA GCAGCTTAAC
CAGCTGGACT ACAAGCCGGA CAGCACGGTC TACAGCGGCG GTGCGGCGAC CTGGTCCAAC
AACGACAAGC TGAGCCCTTA CACCAACAAT ATCATCCAGG TGTGGAGCGA TGGCGATGGC
AAGCATAAGG ATCAGGCCAA AAACGGTTAC GCCTACATCA AGAAGCAGTG CATGCACTGC
GTCGACCCCA ACTGTGTCTC GGTCTGCCCG GTTTCTGCGT TGAAGAAAGA CCCGAAAACC
GGCGTGGTGC ATTACGACGC CAGCATCTGT ACCGGTTGTC GCTATTGCAT GGTGGCTTGC
CCGTTCAATG TGCCCAAGTA CGACTACGAA AACCCGCTCG GCAAGTTGCA CAAGTGCGAA
CTGTGCAACC AGCCAGGTTT GGAACGTCTC GATAAAGGCG GCATGCCGGG GTGCGTGGAA
GTCTGCCCGA CCGGCGCGGT GATTTACGGC ACCCGCGAAC AGCTGCTGGC GGAAGCGAAA
CGCCGCCTGG CGCTCAAGCC GGGTGATGAA TACGCCTATC CGCGCCAGAC GTTGGATCGC
AACGACAGCT ATCTGCACAC CGTTCCCGCC TATGAACGTT ACGTGTACGG CGAAGAGGAA
GCGGGTGGTA CGCAGGTGCT GGTGTTGGCC GGGGTTCCGT ACCAAAACCT GGATATGCCG
ACGCTGGACA CGCTGTCCAC CGGCGCCCGG TCGGAACATA TCCAGCATAC GCTCTACAAG
GGGATGGTGC TGCCGCTGGC GGTGCTGGCC GGGCTGTCGG TGCTGGTGCA TCGCAATACC
CGCGCCGAGC GGGAAGAGGG GCACGAATCA CAGGAGAATC ATCATGACGG CGCATAA
 
Protein sequence
MNRRNFFKLA SAGALLAGTP LASQAEATNR PPIPGALGML YDSTLCVGCQ ACVTKCQQLN 
QLDYKPDSTV YSGGAATWSN NDKLSPYTNN IIQVWSDGDG KHKDQAKNGY AYIKKQCMHC
VDPNCVSVCP VSALKKDPKT GVVHYDASIC TGCRYCMVAC PFNVPKYDYE NPLGKLHKCE
LCNQPGLERL DKGGMPGCVE VCPTGAVIYG TREQLLAEAK RRLALKPGDE YAYPRQTLDR
NDSYLHTVPA YERYVYGEEE AGGTQVLVLA GVPYQNLDMP TLDTLSTGAR SEHIQHTLYK
GMVLPLAVLA GLSVLVHRNT RAEREEGHES QENHHDGA