| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2511 |
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| Symbol | |
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| ID | 8086901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 2946546 |
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| End bp | 2949704 |
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| Gene Length | 3159 bp |
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| Protein Length | 1052 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644836581 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002988110 |
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| Protein GI | 242239929 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTCCC GCTTTTTCAT TTATCGCCCG GTTTTCGCCT GGGTGATCGC CATCGTCATT
ATGCTGGCCG GCGCGTTGTC CATCGAGTCG TTGCCGGTGG CGCAGTACCC GGATGTGGCG
CCGCCGTCGG TATCCATCAA GACCAACTAT CCCGGTGCGT CGGCGGAAAC GCTGGAAAAC
AGCGTCACCC AGGTGATTGA ACAGCAGCTG ACCGGGCTGG ACGGGTTGCT CTATTTTTCG
TCGACCAGCG ACTCCAGCGG CGATGTCAGA ATCACCGTGA CCTTCGCCCA GGGAACCGAC
CCGGATACCG CACAGGTACA GGTGCAGAAC AAAGTGCAGC AGGCCACCAG CCGCCTGCCG
ACCGAAGTGC AGCAACAGGG GTTGACGGTC ACGAAATCGC AGAGCAATTT TTTGCTGATC
GCCGCGCTGT ATGACGTCAC CGATAAAAGC AGCGCCGCCG ATATCGCCGA CTATCTGGTC
AGCAATATGC AGGATGCCCT GTCGCGCGTG GCGGGGGTCG GCAGCGTACA GGTGTTCGGT
TCCCAGTACG CCATGCGTAT TTGGTTGGAT CCGGCCAAAC TGGCGTCCTA CAGCCTGATG
CCGTCGGATA TCTCCTCGGC GATTGAAGCG CAGAACACCC AGGTATCCGC CGGCAAGATC
GGCGGGAAAC CCGCTTCCGC CAATCAGCAA TTGACGGCCA CGGTCACGGC ACAGTCCCGG
CTGAAAACCC CGGAAGAATT TCGCAATATC ATCATCAAAA GCGAAACCAG CGGGGCGTTG
GTTCGGCTGG AGGATGTCGC CCGGGTGGAG ATCGGTAATG AAGATTACTC CATGACCACC
CGGTTGAATG GGCATCCCGG CGCGGGGATT GCGGTCATGC TGTCGCCGGG GGCGAATGCG
TTGTCCACCG CCGAGCGCGT CAAGGCTAAA GTGGCGGAGT TCGAACCGCA GATGCCGCAA
GGCTATAAAG TGGCCTACCC GAAAGACAGT ACCGACTTCA TCAAGATTTC GGTCGAAGAG
GTCGTGAAGA CGCTGTTCGA GGCCATCTTG CTGGTGGTGC TGGTGATGTT CCTGTTCCTG
CAAAACCTGC GTGCAACCTT GATCCCGGCC GTCGCGGTGC CGGTGGTGTT GCTGGGAACC
TTCGGTGTGC TGGCGGTCTT CGGCTATTCC ATCAACACCC TCACGCTATT CGGTATGGTC
TTGGCCATCG GTTTGCTGGT GGATGACGCC ATTGTGGTGG TGGAAAACGT CGAGCGTCTG
ATGCGGGAAG AGCGGATGGC GCCGGCCGCT GCTACCGAAA AATCGATGCG CGAGATCGGC
AGCGCGCTGG TCGGCGTCGC CATGGTGCTG AGCGCCGTCT TTCTGCCGAT GGCGTTCTTC
GGCGGTTCCA CCGGTGTGAT TTATCGCCAG TTCTCCATCA CCATCGTGTC TTCCATGCTG
CTGTCGGTAC TGGTGGCGTT AACGCTGACG CCGGCATTGT GTGCATCGTT GCTGAAACCG
ACGGCGCATG CGTCGACCGG CAACGGCTTT TTCGCCCGCT TCAACCGGGG GTATAACGCG
CTGCAAACCC GTTATGTCGG GCGGGTGGCG CAGGTGCTGA CCCGTTCCTG GCGCTATCTG
GCGCTGTACG GGCTGGTCGT GGCGGTGATG GGGGTGCTGT TCGTGCGGTT GCCGGGCGGT
TTTCTGCCCA ACGAGGATCA AGGCGATGTG ATGGTGCAGT TCACGCTGCC GGCCGGCGCG
ACCGATGCGC GCACCCAAGC AGTGGGAAAG ACTATCGAGA ACTATTTCCT CACCCAGGAG
AAGGACAACG TGGAGGCGAT CTTCGTGATC TCCGGGTTTA ACTTCAGCGG CAGCGGCCAG
AATGCCGGTA TGGCGTTCGT CGCACTGAAA AACTGGAGCC AGCGCTCAGG CGAACAAAAC
AGCGCTGAAA CGATCGCCCG CCGGGCGATG GGGGCGCTCG CCAGTATCCG TGATGCGCAG
GTCTTTACCA TGTCGCCGCC GGCGGTGCAG GGGATGGGGC AATCGAACGG TTTCACCTTT
GAATTGCAGG CGACCGGCAG TACCGATCGC AGCCGGTTGT TGGCGCTGCG CGACCAGTTA
CTGGCCGCAG CGGCGAAGAA CCCACGGTTG TCGGCGGTGC GCCCCAACGA TCTGGCGGAG
ATGCCGCAGT TGCAGGTGGA TATCGACTAC GCCAAAGCCA GCGCGCTGGG GCTGTCGGTC
AGCGATGTCA CCAGTACGTT GAGTAGTGCC TGGGGCAGTA CCTACGTCAA CGATTTTATC
GATCGTGGGC GGGTAAAAAA GGTTTATATT CAGGGGGATG CAACTTCTCG CAGCAAACCG
GCCGATCTCG ATAAATGGTT TGTGCGCGGT ACCGACAGCA GCGGTAACAG CGTCATGACG
CCATTCTCCG CGTTTGCTTC CACGCGCTGG AGCTTCGGCC CGGAGAGCCT GTCGCGCTAC
AACGGGCTGG CGGCCTATGA GATTCAGGGT GCGGCCGCAT CGGGCGTCAG CTCAGGCGAA
GCGATGGACG AGATGGAGTC ACTGGCGCGC TCGCTGCCGT CCGGCACCAC CTTCTCGTGG
AGCGAACTGT CGTATCAGGA ACGGTTGGCC AGCGGGCAGT CGGTATCGTT GTACGCCATT
TCCATTTTGG TGGTGTTCCT GTGTCTGGCG GCGTTGTATG AAAGCTGGAG CGTCCCCTTC
TCGGTGATGA TGGTGATCCC GCTCGGCGTG GTGGGCGCGG TGTTGGCGGC GACCCTGCGC
GGGCTGGAAA ACGATGTCTA TTTTCAGGTG GCGTTGTTGA CCACCATCGG GCTATCGGCC
AAAAACGCCA TCCTGATCGT TGAGTTCGCC GAAGCGGCCT ACCGGCGCGG TGCCACGCTG
TATGAAGCGG CGTTGGAGGG GGCGCGCACC CGGTTGCGTC CGGTGCTGAT GACCTCGCTG
GCGTTTATCG CCGGTGTGCT GCCGCTGGCG GTGGCGACCG GGGCGGGCGC CAACAGCCGT
ATCTCCATCG GCAGCGGTAT TGTCGGCGGG ACGCTGACGG CGACGATACT GGCGATCTTC
CTGGTGCCGT TGTTCTTTGT TCTGGTGCGG CGGGTTTTTT CCGGTCGTAA AAACGAGTCC
CGGCAGTTAC CGGTCGACCC TTCACAGGGA GAAATCTAA
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| Protein sequence | MFSRFFIYRP VFAWVIAIVI MLAGALSIES LPVAQYPDVA PPSVSIKTNY PGASAETLEN
SVTQVIEQQL TGLDGLLYFS STSDSSGDVR ITVTFAQGTD PDTAQVQVQN KVQQATSRLP
TEVQQQGLTV TKSQSNFLLI AALYDVTDKS SAADIADYLV SNMQDALSRV AGVGSVQVFG
SQYAMRIWLD PAKLASYSLM PSDISSAIEA QNTQVSAGKI GGKPASANQQ LTATVTAQSR
LKTPEEFRNI IIKSETSGAL VRLEDVARVE IGNEDYSMTT RLNGHPGAGI AVMLSPGANA
LSTAERVKAK VAEFEPQMPQ GYKVAYPKDS TDFIKISVEE VVKTLFEAIL LVVLVMFLFL
QNLRATLIPA VAVPVVLLGT FGVLAVFGYS INTLTLFGMV LAIGLLVDDA IVVVENVERL
MREERMAPAA ATEKSMREIG SALVGVAMVL SAVFLPMAFF GGSTGVIYRQ FSITIVSSML
LSVLVALTLT PALCASLLKP TAHASTGNGF FARFNRGYNA LQTRYVGRVA QVLTRSWRYL
ALYGLVVAVM GVLFVRLPGG FLPNEDQGDV MVQFTLPAGA TDARTQAVGK TIENYFLTQE
KDNVEAIFVI SGFNFSGSGQ NAGMAFVALK NWSQRSGEQN SAETIARRAM GALASIRDAQ
VFTMSPPAVQ GMGQSNGFTF ELQATGSTDR SRLLALRDQL LAAAAKNPRL SAVRPNDLAE
MPQLQVDIDY AKASALGLSV SDVTSTLSSA WGSTYVNDFI DRGRVKKVYI QGDATSRSKP
ADLDKWFVRG TDSSGNSVMT PFSAFASTRW SFGPESLSRY NGLAAYEIQG AAASGVSSGE
AMDEMESLAR SLPSGTTFSW SELSYQERLA SGQSVSLYAI SILVVFLCLA ALYESWSVPF
SVMMVIPLGV VGAVLAATLR GLENDVYFQV ALLTTIGLSA KNAILIVEFA EAAYRRGATL
YEAALEGART RLRPVLMTSL AFIAGVLPLA VATGAGANSR ISIGSGIVGG TLTATILAIF
LVPLFFVLVR RVFSGRKNES RQLPVDPSQG EI
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