Gene Dd703_2497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2497 
Symbol 
ID8086887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2928530 
End bp2929786 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content63% 
IMG OID644836569 
Productnitrate-binding proteint 
Protein accessionYP_002988098 
Protein GI242239917 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.722347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATT CCCAATCCCC CAAAACCTTT TCCCGTCGTC AGTTTCTGGC GGGCAGCGCC 
GTAGTAGGCG GAACGCTGTT ACTACCGGGG GTGATGAACC ACGCCTGGGC GGCGGGTTCT
GATGCGCCGG AAAAGAAAGA AGTCCGGGTG GGCTTTATTC CGCTCACCGA TTGCGCTTCC
GTGGTGATGG CGGCGGTAAA AGGATTCGAC AAAAAATACG GCATCACCCT TGTCCCCAGC
AAAGAGGCCA GCTGGGCGGC GGTGCGGGAC AAACTGGTTT CCGGCGAACT GGACGCCGCC
CACGTACTCT ACGGCCTGGT GTATGGCTTA CAGGTCGGCG CGGGCGGCCC GCAACACAAC
ATGGCTTCGC TGATGACCAT CAACAACAAC GGGCAGGGCA TCACGCTGGC CAACACGTTG
CGCGAAGCCG GCGTAACGGA TGGCGCCAGC CTGAAAAAAT ACATCGCCGC CAGCCCGGCG
GGCACCTATA CCTTCGCCCA GACGTTTCCC ACCGGCACTC ACGCCATGTG GCTCTATTAC
TGGCTGGGCG CCGCCGGCAT CAATCCGTTT GACGACGTGC GCACGGTGGT GGTGCCGCCG
CCGCAGATGG TCACCAACAT GAAGATCGGC AACATGAGCG GTTACTGCGT GGGCGAACCC
TGGAACCAGC GCGCCATCAT CGAAGGGTTG GGATTCACCG CCGCCACCTC GCAGGACATC
TGGCCGGATC ATCCGGAAAA AATTCTCGGC ACCACCGCCG ACTGGGTCAA CGCCAACCCT
AATACCGCCC GCGCGCTCAC CGCCGCGGTG CTGGAGGCGT CGCGCTGGAT CGATGCCTCC
GACGATAACC GGCGGGAAAC CGCCCGCGTC ATCGCCGGCC GCGCCTATGT CAACACCCAG
GAAGAGGCCA TCGTCGGCCG CATGCTCGGC CAGTACGACA ACGGCGCCGG GCGGGTCTGG
CAGGATGCGC ACGCCATGCA GTTTTACCGC GGCGGCGAGG TGAACTACCC CTGGTTGTCC
GACGGCATGT GGTTCCTGAC CCAGTTCAAG CGTTGGGGGC TGGCGGCGCA GGAGCCGGAT
TATCTGGCGG TGGCGCGTCA GGTCAACCGT AGCGATATCT ACCGGCAGGC TGCCAGCGCG
GTGGGCAATG TGCCGCTGCC CGGCAGCGAC ATGCGCAGCA GCGTACTGAT CGACGGCAAG
CGCTGGGACG GCAGCGATCC CGCCGGATAT GCCAACAGTT TTAGCGTGAA AAAATAA
 
Protein sequence
MSDSQSPKTF SRRQFLAGSA VVGGTLLLPG VMNHAWAAGS DAPEKKEVRV GFIPLTDCAS 
VVMAAVKGFD KKYGITLVPS KEASWAAVRD KLVSGELDAA HVLYGLVYGL QVGAGGPQHN
MASLMTINNN GQGITLANTL REAGVTDGAS LKKYIAASPA GTYTFAQTFP TGTHAMWLYY
WLGAAGINPF DDVRTVVVPP PQMVTNMKIG NMSGYCVGEP WNQRAIIEGL GFTAATSQDI
WPDHPEKILG TTADWVNANP NTARALTAAV LEASRWIDAS DDNRRETARV IAGRAYVNTQ
EEAIVGRMLG QYDNGAGRVW QDAHAMQFYR GGEVNYPWLS DGMWFLTQFK RWGLAAQEPD
YLAVARQVNR SDIYRQAASA VGNVPLPGSD MRSSVLIDGK RWDGSDPAGY ANSFSVKK