Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2497 |
Symbol | |
ID | 8086887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 2928530 |
End bp | 2929786 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644836569 |
Product | nitrate-binding proteint |
Protein accession | YP_002988098 |
Protein GI | 242239917 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.722347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATT CCCAATCCCC CAAAACCTTT TCCCGTCGTC AGTTTCTGGC GGGCAGCGCC GTAGTAGGCG GAACGCTGTT ACTACCGGGG GTGATGAACC ACGCCTGGGC GGCGGGTTCT GATGCGCCGG AAAAGAAAGA AGTCCGGGTG GGCTTTATTC CGCTCACCGA TTGCGCTTCC GTGGTGATGG CGGCGGTAAA AGGATTCGAC AAAAAATACG GCATCACCCT TGTCCCCAGC AAAGAGGCCA GCTGGGCGGC GGTGCGGGAC AAACTGGTTT CCGGCGAACT GGACGCCGCC CACGTACTCT ACGGCCTGGT GTATGGCTTA CAGGTCGGCG CGGGCGGCCC GCAACACAAC ATGGCTTCGC TGATGACCAT CAACAACAAC GGGCAGGGCA TCACGCTGGC CAACACGTTG CGCGAAGCCG GCGTAACGGA TGGCGCCAGC CTGAAAAAAT ACATCGCCGC CAGCCCGGCG GGCACCTATA CCTTCGCCCA GACGTTTCCC ACCGGCACTC ACGCCATGTG GCTCTATTAC TGGCTGGGCG CCGCCGGCAT CAATCCGTTT GACGACGTGC GCACGGTGGT GGTGCCGCCG CCGCAGATGG TCACCAACAT GAAGATCGGC AACATGAGCG GTTACTGCGT GGGCGAACCC TGGAACCAGC GCGCCATCAT CGAAGGGTTG GGATTCACCG CCGCCACCTC GCAGGACATC TGGCCGGATC ATCCGGAAAA AATTCTCGGC ACCACCGCCG ACTGGGTCAA CGCCAACCCT AATACCGCCC GCGCGCTCAC CGCCGCGGTG CTGGAGGCGT CGCGCTGGAT CGATGCCTCC GACGATAACC GGCGGGAAAC CGCCCGCGTC ATCGCCGGCC GCGCCTATGT CAACACCCAG GAAGAGGCCA TCGTCGGCCG CATGCTCGGC CAGTACGACA ACGGCGCCGG GCGGGTCTGG CAGGATGCGC ACGCCATGCA GTTTTACCGC GGCGGCGAGG TGAACTACCC CTGGTTGTCC GACGGCATGT GGTTCCTGAC CCAGTTCAAG CGTTGGGGGC TGGCGGCGCA GGAGCCGGAT TATCTGGCGG TGGCGCGTCA GGTCAACCGT AGCGATATCT ACCGGCAGGC TGCCAGCGCG GTGGGCAATG TGCCGCTGCC CGGCAGCGAC ATGCGCAGCA GCGTACTGAT CGACGGCAAG CGCTGGGACG GCAGCGATCC CGCCGGATAT GCCAACAGTT TTAGCGTGAA AAAATAA
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Protein sequence | MSDSQSPKTF SRRQFLAGSA VVGGTLLLPG VMNHAWAAGS DAPEKKEVRV GFIPLTDCAS VVMAAVKGFD KKYGITLVPS KEASWAAVRD KLVSGELDAA HVLYGLVYGL QVGAGGPQHN MASLMTINNN GQGITLANTL REAGVTDGAS LKKYIAASPA GTYTFAQTFP TGTHAMWLYY WLGAAGINPF DDVRTVVVPP PQMVTNMKIG NMSGYCVGEP WNQRAIIEGL GFTAATSQDI WPDHPEKILG TTADWVNANP NTARALTAAV LEASRWIDAS DDNRRETARV IAGRAYVNTQ EEAIVGRMLG QYDNGAGRVW QDAHAMQFYR GGEVNYPWLS DGMWFLTQFK RWGLAAQEPD YLAVARQVNR SDIYRQAASA VGNVPLPGSD MRSSVLIDGK RWDGSDPAGY ANSFSVKK
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