Gene Dd703_2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2496 
Symbol 
ID8086886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2927603 
End bp2928517 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content62% 
IMG OID644836568 
Productnitrate ABC transporter, inner membrane subunit 
Protein accessionYP_002988097 
Protein GI242239916 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID[TIGR01183] nitrate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.546285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATGC AGACCAATGT CATCCCTCTT ACGCCGGAGC CAGACGCGCC GGTCGTCAGC 
GCGGAGATCG TCTCTCTGCC GGAAAATGCG GCCAACACGG TCGACGTCAC ACCGGTAGCG
CCGGCGGTTG CGCCGTGGTC GCGTCTCACT CGCCTACTGA GCCTGGTTTT ACCGGGCATG
CTGGGGCTGT TGCTGCTGTT GGGCGTCTGG CAGTTGGCGG CGTTGAACAG CAAAGGCTTT
CCCACGCCGT GGCAGACCTG GCAGGCGGCA TTGACCCTGT TCGCCGATCC GTTTTACGTC
GCCGGCCCGA ATGATCAGGG TATCGGCTGG AACGTGCTGG CGTCGATTCG GCGCGTCGCG
GTCGGCTTCG GTCTGGCGGC GCTGGTGGGT ATTCCCGCCG GTTTTCTGAT CGGCCGTTTC
CGGTTTATGG CGGCGATGTT CAACCCGCTG ATTGCGCTGC TGCGCCCGGT CAGCCCGCTG
GCCTGGCTGC CGATCGGGCT GCTGCTGTTC CAGCGCGCCG AACCGGCGTC CAGCTGGACC
ATTTTCATCT GCTCCATTTG GCCGATGATC CTGAATACCG CCGAGGGGGT ACGCCGTATC
CCGCAGGATT ACCTCAATGT GGCGCGGGTG TTGCGCCTGT CTGAATTCAC CATCATGTAC
AAAATTTTGC TGCCGGCGGT GTTGCCGAGC GTATTGACCG GCGTGCGTCT GTCCATCGGC
ATCGCCTGGC TGGTGATCGT GGCGGCCGAA ATGTTGACCG GCGGCGTCGG CATCGGCTTC
TGGATCTGGA ACGAGTGGAA CAACCTCAAT GTGCCTAACA TCATCATCGC CATCTTCATC
ATCGGCGTGG TGGGGCTGCT GCTGGAACAG GGGCTGATGC TGCTGGCCCG CCGCTTCAGT
TATGAAAACC GTTAA
 
Protein sequence
MKMQTNVIPL TPEPDAPVVS AEIVSLPENA ANTVDVTPVA PAVAPWSRLT RLLSLVLPGM 
LGLLLLLGVW QLAALNSKGF PTPWQTWQAA LTLFADPFYV AGPNDQGIGW NVLASIRRVA
VGFGLAALVG IPAGFLIGRF RFMAAMFNPL IALLRPVSPL AWLPIGLLLF QRAEPASSWT
IFICSIWPMI LNTAEGVRRI PQDYLNVARV LRLSEFTIMY KILLPAVLPS VLTGVRLSIG
IAWLVIVAAE MLTGGVGIGF WIWNEWNNLN VPNIIIAIFI IGVVGLLLEQ GLMLLARRFS
YENR