Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2468 |
Symbol | |
ID | 8086858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 2888895 |
End bp | 2890076 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644836541 |
Product | secretion protein HlyD family protein |
Protein accession | YP_002988070 |
Protein GI | 242239889 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGATA CCACCTCCAC TTCCGTTTCT CCGGCACCCG GACGACGTAA ACGTCAGTTT GCCATTCTGT TCATTGTGCT GTTGCTGGCT GCTGCGGGAT GGGGCGCTTA CTACCAGTTT TATCTGCGTT TTTATGAAGC CACCGACGAT GCTTATGTGA ACGGCAACCT GATCACGTTG ACGCCTCAAA TCAGCGGCAC AGCGACAACA GTCAGTGTTG ATGACGGCGA TTATGTGGAG AAAGGGCAGG TGCTGGTGCA GCTCAGCCCG AGCGACACGC TGATCGCGCT GCAACAGTCG GAAGCCTCGC TGGCCAAGAC CGTGCGTGAG GTTCGGGGGC TTTACAGCAC CGTCGACAAC TATCAGGCCC AAGTGGTGTC CAGGCAGGTG GCGCTGCAAC AGGCGATTGG CGATTACAAT CGCCGCCGGG GCCTGGTGGC CAAAGGCGCT ATTTCCACCG AAGATTTGGC GCATTATCAG GACGCGGTCA ACAGCGCGCG TAGTGCGCTC GATGCAGCCG AGCAGAGCTT GCGCACCAAT CAGGCGATGG TGGACAACAC CGTGATTGAC GATCATCCGG ATATCAAAAG CGCTGTAGCC GATTTACGCA GCAAATATCT GGACTGGGCG CGGAGCACTA TTGTCGCGCC GGTCAGTGGT TATGTCGCCA AGCGTGCGGT GCAGGTGGGG ATGCGGGTCA GCGCCGGTGC GACGCTGATG TCCATTGTTC CGCTCGAACA GGTCTGGGTT GATGCCAATT TCAAAGAAAG CCAGATGCAA CAGATGCGGT TAGGGCAATC AGTGACCCTG ACGGCGGATA TCTATGGCGA CAACGCGCAG TATCACGGCA CGATACAGAG CCTGGGGATC GGTACCGGCA GCGCGTTCTC GCTGCTGCCC GCGCAAAATG CCAGCGGTAA CTGGATCAAG ATAGTACAGC GATTGCCAGT ACGCATCGCG CTGGATCCCG AGGCGCTGAA GCAGCACCCG CTGCGTATCG GGCTGTCGAT GCAGGCTCGG GTCGATCTCC GCGACAACCA CGGCGAATTG TTGCCGACGG CCACCGTTAA TACGCCGCGC TACAGTACGG ATGTGTATGA CGATCCGTTG CAGCAGGCCG ACAAGCTGGT GGCGAAAATT CTGCACGACA ACAGCCTGCC GCTAACGGGC AGCCGGGGCT AG
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Protein sequence | MMDTTSTSVS PAPGRRKRQF AILFIVLLLA AAGWGAYYQF YLRFYEATDD AYVNGNLITL TPQISGTATT VSVDDGDYVE KGQVLVQLSP SDTLIALQQS EASLAKTVRE VRGLYSTVDN YQAQVVSRQV ALQQAIGDYN RRRGLVAKGA ISTEDLAHYQ DAVNSARSAL DAAEQSLRTN QAMVDNTVID DHPDIKSAVA DLRSKYLDWA RSTIVAPVSG YVAKRAVQVG MRVSAGATLM SIVPLEQVWV DANFKESQMQ QMRLGQSVTL TADIYGDNAQ YHGTIQSLGI GTGSAFSLLP AQNASGNWIK IVQRLPVRIA LDPEALKQHP LRIGLSMQAR VDLRDNHGEL LPTATVNTPR YSTDVYDDPL QQADKLVAKI LHDNSLPLTG SRG
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