Gene Dd703_2446 details

Gene Information

• Locus tag: Dd703_2446
• ID: 8086834
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 2866620
• End bp: 2868599
• Gene Length: 1980 bp
• Protein Length: 659 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644836519
• Product: glycoside hydrolase family 3 domain protein
• Protein accession: YP_002988050
• Protein GI: 242239869
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1472] Beta-glucosidase-related glycosidases

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.802964
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACGCT TACCCACGAT ATGTCGTACC CCAACGGTGT TGGCGCTAAG CGCCGCGCTG 
CCTTTGCTGT TTTCCCCGCT GGCATCCGCC GTCCAACAGG CGGTATTGGA GACCCGCGAT 
ATCAGACTGA TCAGTGTTGA TGGCTTGCAG TTCAGGGATC TCAACCGGGA TGGCAAACTC 
AACCCGTATG AAGACTGGCG TCTGCCGGCG GCGGTGCGTA CCGCCGATCT GGTATCCCGC 
ATGACGCTGG CGGAAAAAGC CGGCGTGATG ATGCACGGTT CGGCGCCGAC CGCCGGGAGC 
GTCATCGGCG CCGGCGCGCA TTATGACCGG CAGAGCGCCC GCGCGCTGAT CGCCGATCTC 
CACATCAACA GCTTTATCAC CCGCCTTTCC GGCGACAACC CGGCGCAGAT GGCGGACGAA 
AACAACGCAT TACAGCAGTT GGCGGAAGCC ACCCGGCTGG GGATCCCCAT CACCATCAGC 
AGCGACCCGC GCAATGCCTT TCAGTCGCTG GCCGGCGCCA GCAGCGCCGC GGGTAAATTC 
AGCAAATGGC CGGAAACACT CGGGCTCGCC GCCATCGGCG ATGAGACGCT GGTGAGACGT 
TTCGCCGATA TCGTCCGGCA GGAATACCGC GCCGTCGGGA TTACCGAAGC GCTGTCGCCG 
CAGGCGGATC TCGCCACGGA GCCGCGCTGG CCGCGCATTG ACGGTACCTT CGGCGAAGAC 
CCGGCCCTGA CGAAAAAAAT GGTGCACGGC TACGTCGCCG GCATGCAAAA CGGCACCGGC 
GGCCTTAACG ATGGCAGCGT CATTGCGGTG GTCAAACATT GGGTCGGCTA TGGCGCGGCG 
CAAGACGGCT GGGACAGCCA CAACGCCTAC GGCAAATACG CCCGTTACGG TAAAGATGGG 
TTGCAATCCC ACATCGAGCC GTTTACCGGC GCCTTCGCCG CCCACGCCGC AGGCATCATG 
CCCACCTACT CCATCCTGCG CGGCGCCACC TGGCGCGGCG TGCCTATCGA ACCGGTCGGC 
GCCGGTTTCA ATAAGTTTCT GCTTACCGAC CTGCTGCGCG ACCAATACGG TTTTGACGGT 
GTGATCCTCA GCGACTGGCT GATTACCAAT GATTGCAAGG GTGATTGCGT CACCGGCGTC 
GGGCCGGGCG AAAAACCGGT GCCGCGCGGC ATGCCCTGGG GCGTGGAGCA TCTGACGTCC 
TATGAACGCT TTATCAAAGC GGTCAACGCC GGCATCGATC AATTCGGCGG CGTCACGGAT 
TCAGCCATGT TGGTCAAAGC GGTGCGGGAA GGCCGTTTGC GGGAATCCCG GCTGGATGCG 
TCCGTCACCC GGATCCTGCA ACAGAAATTC CAGACCGGGC TGTTCGAACG GCCGTTCGTT 
AAGGCAGAAC AGGCGGGAAA CGTGGTCGGC AATCCGCAAT CGCAGCAACT GGCTAATAAT 
GCCCAGGCGC AGGCACTGGT GCTATTGCAG AACAAACAGT TGCTGCCGCT GCGTCCGGGG 
AGCCGGTTGT GGGTCTACGG CATCGACCCG GCGGCGGTGA AAAATGCCGG CTTCATACCG 
GCCACGCGGC TGGAAGAGGC CGACATCGCG CTGATCCGCA CCCGCACGCC CTACGAGCAG 
CCGCATAAAA ACTACTTTTT CGGCAGCCGA CACCACGAAG GTTCGCTAGC CTTCAGCGCG 
GATAATCCCG ACTATCAGGC TATCGTGCGC GCCAGCGCCC GCGTGCCTAC CGTCGTCACC 
CTGTATCTGG AGCGGCCCGC CGTCCTGGCG AATGTGGTGA ACAAGACCCA GGCGCTGGTC 
GCCAATTTCG GTGTTAGCGA CGCGGTATTG CTACAGCGGT TGTCGTCTTC TGCGGACTAT 
ACCGCCAGGT TGCCATTCGA GCTGCCATCC TCCATGCAGG CGGTGCTGAA ACAGCGTTCG 
GATCTTCCCC ACGACAGTGC CGCCCCCTTG TTCCCGTTCG GGTTCGGGCT GCCGCGCTGA 

 

Protein sequence

MTRLPTICRT PTVLALSAAL PLLFSPLASA VQQAVLETRD IRLISVDGLQ FRDLNRDGKL 
NPYEDWRLPA AVRTADLVSR MTLAEKAGVM MHGSAPTAGS VIGAGAHYDR QSARALIADL 
HINSFITRLS GDNPAQMADE NNALQQLAEA TRLGIPITIS SDPRNAFQSL AGASSAAGKF 
SKWPETLGLA AIGDETLVRR FADIVRQEYR AVGITEALSP QADLATEPRW PRIDGTFGED 
PALTKKMVHG YVAGMQNGTG GLNDGSVIAV VKHWVGYGAA QDGWDSHNAY GKYARYGKDG 
LQSHIEPFTG AFAAHAAGIM PTYSILRGAT WRGVPIEPVG AGFNKFLLTD LLRDQYGFDG 
VILSDWLITN DCKGDCVTGV GPGEKPVPRG MPWGVEHLTS YERFIKAVNA GIDQFGGVTD 
SAMLVKAVRE GRLRESRLDA SVTRILQQKF QTGLFERPFV KAEQAGNVVG NPQSQQLANN 
AQAQALVLLQ NKQLLPLRPG SRLWVYGIDP AAVKNAGFIP ATRLEEADIA LIRTRTPYEQ 
PHKNYFFGSR HHEGSLAFSA DNPDYQAIVR ASARVPTVVT LYLERPAVLA NVVNKTQALV 
ANFGVSDAVL LQRLSSSADY TARLPFELPS SMQAVLKQRS DLPHDSAAPL FPFGFGLPR