Gene Dd703_2422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2422 
Symbol 
ID8086810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2840961 
End bp2842100 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content60% 
IMG OID644836495 
ProductABC-2 type transporter 
Protein accessionYP_002988026 
Protein GI242239845 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.108502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACCGG ATAGCACCCG TTTTTCCTGG CGTCGGTTGC GCGCGCTGTG CCTGAAAGAG 
ACGCGCCAGA TTCTGCGCGA CCCCAGCAGC GCGCTGATCG CATTCGTGAT CCCGCTGTTG
CTGCTGTTCA TCTTCGGTTA CGGCATCAAT CTCGACTCTA GCCGTCTGCA TGTCGGCGTA
CTGCTGGAAC AACGCAGCGA CGACGCCAAC AGCCTGGCGC GGGCGTTTTC CGGCTCGCCG
TTCCTCCAAC CGGTCATCAG TGATAATCGC CCGGCGCTGA TCGCCATGAT GCAGGAAGGG
CGGATCCGCG GCCTGATCGT GATCCCGCCG GACTTCGCCG CACGCATGGC GCGCCCGGAG
GACAACGCGC CGATCCAGGT GATCACCGAC GGTAGCGAGC CCAACACCGC GAATTTCGTC
AAAGGCTACG CGCAAGGGGT ATGGCTGGTC TGGCAACAGG AACGGGCCCG GGAACGCGGG
GAGAATTTCA GCCAATTGAT TGACGTGCAG TCGCGTTACT GGTTCAACGC CGCCGCCATC
AGCCAGCATT TCATCATTCC CGGCGCCATC ACCATCATCA TGACGGTGAT CGGCGCCATC
CTGACCTCGC TGGTGATCGC CCGAGAATGG GAGCGCGGCA CCATGGAAGC CCTGCTGTCC
ACCCAGGTGA CGCGCACCGA ACTGCTGCTG ACCAAGCTGA TCCCTTACTA TGTGCTGGGA
ATGATCGCCA TGGTGTTGTG CGTCGCGGTG GCGGTATTCG TGTTGCATGT CCCCTATCGC
GGCTCGCTGT GGTTGCTGTT CGGTTTTAGC AGCCTGTTTC TGGCCTGTAC GCTCGGCATG
GGGTTATTGA TCTCCACCCT GACCCGCAAC CAGTTCAATG CCGCGATGGT GGCGCTGAAT
GCCGCGTTTT TACCTGCGGT GATGCTCTCT GGCTTCATTT TTGAAATCAA CAGCATGCCG
GCACTGGTGC AGGCGGTTTC CTACCTGATC CCGGCCCGTT ATTTCGTCAG CACGCTGCAA
ACGCTGTTTC TGGCGGGCAA CATCGGCAGT GTGCTGTTGA TCAACCTGCT GTTTTTGATC
GTCTCCGCGG TGTTTTTCAT CGGCCTGACG GCCTGGAAAA CACGGCGGCG CCTGGATTAA
 
Protein sequence
MSPDSTRFSW RRLRALCLKE TRQILRDPSS ALIAFVIPLL LLFIFGYGIN LDSSRLHVGV 
LLEQRSDDAN SLARAFSGSP FLQPVISDNR PALIAMMQEG RIRGLIVIPP DFAARMARPE
DNAPIQVITD GSEPNTANFV KGYAQGVWLV WQQERARERG ENFSQLIDVQ SRYWFNAAAI
SQHFIIPGAI TIIMTVIGAI LTSLVIAREW ERGTMEALLS TQVTRTELLL TKLIPYYVLG
MIAMVLCVAV AVFVLHVPYR GSLWLLFGFS SLFLACTLGM GLLISTLTRN QFNAAMVALN
AAFLPAVMLS GFIFEINSMP ALVQAVSYLI PARYFVSTLQ TLFLAGNIGS VLLINLLFLI
VSAVFFIGLT AWKTRRRLD