Gene Dd703_2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2420 
Symbol 
ID8086808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2838232 
End bp2839236 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content63% 
IMG OID644836493 
Producthypothetical protein 
Protein accessionYP_002988024 
Protein GI242239843 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0441115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA AAACCGGGCT ATTGACGGCG CTTGCATTGT TGGCCGTCGC CGCTGTCGGT 
TATGGCGTAA CGGAATACCG ACGACAGCAG GATACGCCGC TGACGCTATA CGGCAACGTA
GATATCCGCA GCGTCCATTT GGGGTTTCGC GTCGGCGGGC GTCTGGCGAC ACTCAATGTA
GACGAGGGGG ACGCCATCCA ACCGGGGCAG GCGTTAGCCC AACTGGATGA CGCGCCGTAC
CGAAACGCGC TGCGGCAGGC GCAGGCCAAC GTCGCCAGCG CCCAGTCTCA ACTGGCGTTG
CTGCGGGAAG GCTATCGCAG CGAGGAAATC GAACAGGTGC GCTCGCAGAT GGCGCAGGCA
CAAGCCGCCT ACGACTATGC CAACCGCTTC TACCAGCGCC AATTGGGGCT GTGGCAACAG
CGCACCGTCG CCGCCAACAC GCTGGAAGAC GCCAAAGCCA CGCGGGATCA GGCGCTGGCC
ACGCTGAACG CCGCCAAAGA AAAATTCAGC CAGTACCAGC GCGGCAACCG GCCGCAGGAA
ATCGCCGCCG CCGAAGCGTC GCTGGCGCAG ACGCAGGCCG CCGAAGCGCA GGCCGAACTG
AATCTCCAGG ATACGGCGCT ACATGCCCCT TCGGCCGGCG TCATTCTGAC CCGCGCCGCC
GAGGCCGGCA GCATGCTGAG CGCCGGCGGC ACCGTTTTTA CCCTCTCACT CACCCATCCG
GTCTGGATCC GCGCCTACGT CAGTGAAAAA AATCTGGGTC GCACCGCCCC CGGCAGCGAG
GTACTGATCT TTACCGACGG ACGCCCCGCG CATCCCTACC ACGGCAAAAT CGGTTTTGTC
TCACCCAGCG CCGAATTCAC GCCCAAAAAT GTGGAAACCG ACGATCTGCG TACCGATCTG
GTCTATCGGC TGCGAATTAT CGTCGGCGAT GCCGACGACG GTCTGCGGCA AGGTATGCCG
GTCACGCTAC GTCTGGTACA GGACACCGCG TCGCATGGGC AATGA
 
Protein sequence
MNKKTGLLTA LALLAVAAVG YGVTEYRRQQ DTPLTLYGNV DIRSVHLGFR VGGRLATLNV 
DEGDAIQPGQ ALAQLDDAPY RNALRQAQAN VASAQSQLAL LREGYRSEEI EQVRSQMAQA
QAAYDYANRF YQRQLGLWQQ RTVAANTLED AKATRDQALA TLNAAKEKFS QYQRGNRPQE
IAAAEASLAQ TQAAEAQAEL NLQDTALHAP SAGVILTRAA EAGSMLSAGG TVFTLSLTHP
VWIRAYVSEK NLGRTAPGSE VLIFTDGRPA HPYHGKIGFV SPSAEFTPKN VETDDLRTDL
VYRLRIIVGD ADDGLRQGMP VTLRLVQDTA SHGQ