| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2410 |
|---|
| Symbol | |
|---|
| ID | 8086798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 2827918 |
|---|
| End bp | 2828880 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644836483 |
|---|
| Product | tRNA-dihydrouridine synthase C |
|---|
| Protein accession | YP_002988014 |
|---|
| Protein GI | 242239833 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0042] tRNA-dihydrouridine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.148461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTGT TACTGGCCCC GATGGAAGGG GTATTGGATT CCCTGGTCAG GGAATTGCTC
ACCGAAGTGA ATGATTATGA TCTTTGCATC ACCGAGTTTT TACGGGTGGT GGATCAACGC
CTGCCGGTAA AGGCGTTCTA CCGCCTTTGC CCGGAGCTGC GCCACGACAG CCGCACGCCG
TCAGGGACGC GGGTGCGGGT GCAGCTATTG GGGCAATACC CGCAATGGTT GGCGGAGAAT
GCTGAACGGG CGGTGTCGCT GGGATCCTGG GGTGTGGATC TGAATTGCGG CTGCCCGTCG
AAGATGGTGA ACGGCAGCGG CGGCGGCGCA ACGCTGCTGA AAGATCCCGA ATTGATCTAT
CAGGCGGCGA AAGCCATGCG GGAGGCGGTG CCGGCGGCGT TGCCGGTAAC AGTGAAGATC
CGGCTGGGCT GGGATTCCGG CGCGCGGCGG TTTGAGATTG CCGACGCGGT ACAGCAGGCA
GGCGCGACGG AGCTGGTGGT ACACGGCCGT ACCAAAGAAG ACGGGTATCA GGCCGAGCGC
ATCAACTGGG CGGCGATTGG GGAAATCCGC CGCCGTCTGA CGATCCCGGT GATCGCCAAC
GGGGAAATCT GGGACTGGCA GAGCGCGCAG GATTGCCTGG CCGCTACCGG ATGCGATGCG
GTAATGCTCG GGCGCGGTGC GCTGAATGTG CCCAACCTGA GCCGGGTGAT TAAATACCGT
GAGGCGCGCA TGCCGTGGGC GGACGTGGTT CGGTTGTTGC AAAAGTACGT GCGGCTGGAG
AAGCAGGGGG ATACCGGCCT GTATCATGTC GCCCGCATTA AGCAGTGGCT GGGGTATCTG
CGCAAGGAGT ACGCCGAGGC CGGCTGTCTG TTTAGTCAGG TTCGGGCTTT GGCGACCTCG
TCGGCCATCG CCCAGGTGAT TGAACACTAT CGGCGAGACG AGACAGTGCC AGAAGCGCGA
TAA
|
|---|
| Protein sequence | MRVLLAPMEG VLDSLVRELL TEVNDYDLCI TEFLRVVDQR LPVKAFYRLC PELRHDSRTP
SGTRVRVQLL GQYPQWLAEN AERAVSLGSW GVDLNCGCPS KMVNGSGGGA TLLKDPELIY
QAAKAMREAV PAALPVTVKI RLGWDSGARR FEIADAVQQA GATELVVHGR TKEDGYQAER
INWAAIGEIR RRLTIPVIAN GEIWDWQSAQ DCLAATGCDA VMLGRGALNV PNLSRVIKYR
EARMPWADVV RLLQKYVRLE KQGDTGLYHV ARIKQWLGYL RKEYAEAGCL FSQVRALATS
SAIAQVIEHY RRDETVPEAR
|
|---|
| |