| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2315 |
|---|
| Symbol | |
|---|
| ID | 8086702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 2725598 |
|---|
| End bp | 2727109 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644836389 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002987921 |
|---|
| Protein GI | 242239740 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0829639 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATAA CACCGCCATC ACGTCTGGAA ATGCGCTGCA TTTCCATTTC TTTCGCTGGT
TTCCCGGCAC TCAGGCAAGT GAATTTTTCG CTGGAGGGGG GATCCATCCA TGCGCTGACC
GGCGCCAACG GCGCGGGCAA GTCAACGCTG ATGGCGGTGC TGTCCGGCGC TTATGACCAC
TACCGCGGCG ATATCCTGCT GGACGGCGAA AAGATCGCCC TTCGTTCTCC GCGCGATGCC
AAACGCCACG GCATCCATCT GGTGCAGCAA GAGGTGGACG CCGCGCTGGT GCCCACGCTG
TCGGTCGCGG AAAACATCAT GCTCGATAGG CTGGCGGAGC CGGGCCTGCT GCTGAACTGG
TCACAGTTGC GCCGCCAGGC GGAATCCCTG CTGGCGCAAT TAGGTGTCGG CATCAATGTT
CGCCAGCGGC TCGACCGCTG CTCGCTGGCC GAGAAACAGC AGATCCTGTT GGCGCGCGCG
CTGTCCCACC GCTGCCGTTT CCTGATTCTG GACGAACCCA CCGCGCCGCT CGACCACACG
GAAAGCGAGC GCCTGTTCGG CGTAGTACGC CGCCTGCAAC GTGAAGGCAT CGGCATCGTC
TTTATCTCCC ACCGGATTCA TGAACTCAGC GCCATCTGTG ACACCCTCAC CGTGCTGCGC
GACGGCGAAT TCGTCAGCAG CGGCGCCATG CAAGGGCTCA GCGGTGAAGA GATAGTGGAG
CGGATGCTGG GGCATCGGCT GGACGATATT TTCCCGCCGC GCCGCACGCT GCCGGATACC
GAGCCCCTGT TGCAGATTCA GGGGCTGCAC GACGATACGT TGCTGCACGA TATCAGGCTG
ACCCTGCGCA AGGGCGAGAT TCTGGGGGTC GCGGGGCTGG CGGGCGCGGG CAAAAGCGAA
CTGTGCAAAG CGCTGTTCGG CGCCACCCGC AGCCGGCTGG AGGAAGCATC TTATCAGGGC
AACCCCTGGC GGCCGACCTC GCCGGCGCAT TCGGTGGCGC AGGGCATCGC GCTGGTGCCG
GAGGAGCGGC GCAAAGAAGG CATTTTTATT GACGAATCCG TCGCCATGAA CCTCAGCATC
AGCGCCAGCG ACAGCTTCTC CCGCTACGGT ATTTTCGGGC ATGGCCAGGC GCTGTCCTGG
GCCAGGGATC TGATCCATCG GCTGACCATC CGCGCCCGCG GGCCACAGCA GAAACTGCGG
CGATTGTCCG GCGGCAACCA GCAGAAGGTG GCCATCGGCA AGTGGCTACG CAACGACATG
CAGGTACTGA TTCTGGATGA GCCGACCAAA GGCGTAGACA TCAAAGCCAA ACAGGATTTG
TTCGCCCTGA TTGGCGAACT GGCGCAGCAA GGCAAAGGCA TCATTTACGC TTCCGGCGAA
TTTTCCGAGC TGGTGGGGTT GTGCGACCGC ATCTGCGTCT TGTGGGATGG GCGGATCGTG
GCTGAACTGG ACGCCGCTCA GACCGACGAA GAAACATTAT TACTCTATTC AACCGGAGGA
ACTCCCGCGT GA
|
|---|
| Protein sequence | MSITPPSRLE MRCISISFAG FPALRQVNFS LEGGSIHALT GANGAGKSTL MAVLSGAYDH
YRGDILLDGE KIALRSPRDA KRHGIHLVQQ EVDAALVPTL SVAENIMLDR LAEPGLLLNW
SQLRRQAESL LAQLGVGINV RQRLDRCSLA EKQQILLARA LSHRCRFLIL DEPTAPLDHT
ESERLFGVVR RLQREGIGIV FISHRIHELS AICDTLTVLR DGEFVSSGAM QGLSGEEIVE
RMLGHRLDDI FPPRRTLPDT EPLLQIQGLH DDTLLHDIRL TLRKGEILGV AGLAGAGKSE
LCKALFGATR SRLEEASYQG NPWRPTSPAH SVAQGIALVP EERRKEGIFI DESVAMNLSI
SASDSFSRYG IFGHGQALSW ARDLIHRLTI RARGPQQKLR RLSGGNQQKV AIGKWLRNDM
QVLILDEPTK GVDIKAKQDL FALIGELAQQ GKGIIYASGE FSELVGLCDR ICVLWDGRIV
AELDAAQTDE ETLLLYSTGG TPA
|
|---|
| |