Gene Dd703_2284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2284 
Symbol 
ID8086671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2689046 
End bp2689891 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content60% 
IMG OID644836358 
Productputrescine transporter subunit: membrane component of ABC superfamily 
Protein accessionYP_002987890 
Protein GI242239709 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.408593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAATT TACCGGTAGT GCGTTCGCCG TGGCGCATTC TGATTCTGGT ACTGGGTTTT 
ACCTTCCTGT ACGCGCCGAT GCTGATGCTG GTTGTCTACT CGTTCAACAG TTCGCGCCTG
GTGACGGTAT GGGCGGGCTG GTCGACCCAG TGGTACAGCG CGCTGTTTGA AGACTCGGCG
ATGATAAGCG CCGTGGCGCT CAGCCTGACT ATCGCCGCCG CCTCGGCGAC GATGGCGGTG
GTGATTGGCA CGTTGGCGGC GGTGGTGATG GTGCGCTTCG GTAATTTTCG CGGTTCTACC
GGCTTTGCCT TTATGCTGAC CGCGCCGCTG GTGATGCCGG ATGTGATCAC CGGCCTGTCG
CTGCTGCTGT TGTTTGTTGC GTTGGGGCAC GCCATCGGCT GGCCGGCGGA ACGCGGCATG
TTCACCATCT GGCTGGCGCA TGTCACCTTC TGCTCGGCCT ATGTCACGGT GGTGATCAGT
GCGCGTCTGC GTGAACTGGA TCATTCGATC GAGGAAGCGG CGATGGATCT TGGTGCGACG
CCGCTGAAAG TGTTTTTCAT CATCACGGTG CCGATGATTG CGCCGGCGCT GATTTCCGGC
TGGCTGCTGG CGTTCACGTT GTCGCTGGAT GATCTGGTGA TCGCCAGTTT TGTGTCCGGG
CCGGGCGCGA CGACGCTGCC GATGCTGGTG TTTTCCAGCG TGCGCATGGG GGTCAACCCG
CAGATCAACG CCCTGGCGTC GTTGATTTTG CTGGTCGTCG GCGTTATCGG GCTGATCGCA
TGGTGGTTTA TGGCGCGGGC GGAAAAACAG CGGTTGCGGG ATTTACGACG CGCGGTGCAT
AACTAA
 
Protein sequence
MNNLPVVRSP WRILILVLGF TFLYAPMLML VVYSFNSSRL VTVWAGWSTQ WYSALFEDSA 
MISAVALSLT IAAASATMAV VIGTLAAVVM VRFGNFRGST GFAFMLTAPL VMPDVITGLS
LLLLFVALGH AIGWPAERGM FTIWLAHVTF CSAYVTVVIS ARLRELDHSI EEAAMDLGAT
PLKVFFIITV PMIAPALISG WLLAFTLSLD DLVIASFVSG PGATTLPMLV FSSVRMGVNP
QINALASLIL LVVGVIGLIA WWFMARAEKQ RLRDLRRAVH N