| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2255 |
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| Symbol | |
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| ID | 8086642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 2650405 |
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| End bp | 2652849 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644836330 |
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| Product | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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| Protein accession | YP_002987862 |
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| Protein GI | 242239681 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.848686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAATG TCAAGAAATC TTCTGTACTC CTATACCCGC TCAGCCGCCG TTCGTTGGTA
AAAAACGGCG CGCTGTGCGG TATTGCGGCG GCAGTCGGCA ACCTGGCGTT ACCCTTTGCC
AGCCGGGCGT TCGCCGGGCA ATCCGTCTCT TCATCAACGT CTGCGGAACA GGTTATCTGG
AGTGCCTGTA CCGTAAACTG CGGCAGTCGA TGCCCATTGC GTATGCATGT GGTTGACGGC
GAAATTCGTT ACGTTGAAAC CGATAATACC GGCGATGACG AGTACGACGG TCTGCATCAG
GTGCGGGCTT GCCTGCGGGG CCGTTCGATG CGCCGTCGCG TTTATCATCC CGACCGTTTG
AAGTACCCGA TGAAGCGCGT GGGCAAGCGC GGAGAAGGGA AATTTGAGCG CATCAGTTGG
GATGAAGCGC TGGATATCGT CGCGGCCAGC CTGAAAAACA CCGTGAGCAA ATATGGTAAT
GAAGCCGTCT ACCTGAATTA CGGCACCGGC ACGCTGGGCG GGACGATGAC GCGCTCATGG
CCGCCGGGGA AAACGCTGGT GGCGCGTCTG ATGAATTGCT ATGGCGGCTA CCTCAACCAT
TACGGCGATT ACAGCACCGC GCAGATTACG GTCGGGCTGA ATTATACATA CGGCGGCTGG
GCGGACGGCA ACAGCCCCTC GGATATCGAA AACAGCAAAC TGGTGGTGCT GTTCGGTAAT
AACCCGGCCG AAACCCGGAT GAGCGGGGGC GGCGTGACCT ATTATCTGGA GGAAGCGCGC
CGGAAGTCGA ACGCCAAACT GATTGTTATC GATCCCCGCT ACACCGATAC CGGCGCCGGC
CGGGAAGACG AATGGATCCC CATCTATCCG GGGACGGACG CCGCGCTGGT GGCGGGGATA
GCGTATGTGC TGATCACCGA AAATCAGGTG GATCAGGCCT TTTTGGATAA ATACTGCGTT
GGCTACGATG AGAAAACCCT GCCGCCCGGC GCGCCGGCTA ACGGGCATTA CAAAGCCTAT
ATCCTCGGGC AGGGCGCGGA CGGTATCGCC AAGACGCCGC AGTGGGCGGC GGCCATTACC
CGTATCCCGG CCGAGACCAT CATCCGGCTG GCGCGGGAAA TCGGCAGCGT CAAACCGGCC
TTCATCGCCC AGGGATGGGG GCCGCAGCGG CGCGCCAATG GCGAACTGAC CTCGCGGGCG
ATCGCCATGC TGCCGATCCT TACCGGCAAC GTGGGGATTC ACGGCGGTAA CAGCGGCGCA
CGGGAAAGTT CCTACGGGAC GGCATTCGTG CGGATGCCGA CATTGACCAA CCCGGTGAAA
ACCAGCATCT CCATGTTCAT GTGGACGGAC GCCATCGAAC GAGGGCCGGA AATGACGGCG
TTGAAGGATG GGGTGCGCGG TAAGGATAAG CTGGACGTAC CGATTAAATT CATCTGGAAC
TATGCCGGCA ACTGTTTGAT TAATCAGCAT TCCCAAATCA ATCGTACCCA TGAAATCCTG
CAGGATGACA GCAAGTGCGA AATGATTGTG GTGATCGATA ATCACATGAC GGCCTCTGCG
AAGTACGCCG ATATCCTGTT GCCGGACTGT ACGGCGGCGG AGCAGATGGA TTTTTGTCTG
GATGCCTCCT GCGGCAACAT GGCTTATGTG ATTTTCGCCG ATCGGGTGAT TGCCCCCCGG
TTTGAGTGCC GCACGATCTA CGACATGCTG ACCGATCTCT CTCGACGGCT GGGGGTGGAG
CAGGCCTTCA CCGAAGGGCG CACTCAGGAA CAATGGATGC GCTACCTGCA CCAGCAGTCG
CGGGCATTGA TGCCGGCGCT GCCGGAGTTT GATTCATTCC GTCAGCAAGG GATGTATAAG
GAGCGCGATC CCAACGGGCA TTTTGTGGCG TACAAGGCAT TCCGCGCCGA CCCGCAGGCC
CACCCGCTGA CCACGCCGTC CGGAAAGATT GAGATTTACT CCGCGGCGCT GGCTGCCATC
GCCGGTAGCT GGACGTTATC GCCGGGCGAC GTCATCGACC CGTTGCCGGT TTATCATGCC
GGTTTCGAAA ACTATGACGA CCCGCTCATG CGTCATTATC CGCTGCAACT CAGTGGGTTC
CATTATAAAT CCCGCACCCA TTCCACTTAC GGCAATGTTG AATTGCTCAA AGCCGCGTGT
CCGCAGGAAA TGTGGATCAA CCCGCTTGAC GCCCGCGCCC GCGGGATTGC CAGCGGCGAT
CGGGTACGTA TCTGGAACGA TCGGGGCCAG GTTGACGTGG CGGCCAAAGT CACGCCGCGC
ATTATTCCCG GCGTCGTCGC GCTGGGAGAA GGGGCTTGGT ATGACCCGGA TGCCCGTCGG
GTCGATCAGA GCGGCTGCAT TAATGTGCTG ACGACGCAAC GCCCTTCGCC GCTGGCGAAA
GGGAACCCCT CACATACCAA TCTGGTTGAA GTACAAAAAA TTTAG
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| Protein sequence | MNNVKKSSVL LYPLSRRSLV KNGALCGIAA AVGNLALPFA SRAFAGQSVS SSTSAEQVIW
SACTVNCGSR CPLRMHVVDG EIRYVETDNT GDDEYDGLHQ VRACLRGRSM RRRVYHPDRL
KYPMKRVGKR GEGKFERISW DEALDIVAAS LKNTVSKYGN EAVYLNYGTG TLGGTMTRSW
PPGKTLVARL MNCYGGYLNH YGDYSTAQIT VGLNYTYGGW ADGNSPSDIE NSKLVVLFGN
NPAETRMSGG GVTYYLEEAR RKSNAKLIVI DPRYTDTGAG REDEWIPIYP GTDAALVAGI
AYVLITENQV DQAFLDKYCV GYDEKTLPPG APANGHYKAY ILGQGADGIA KTPQWAAAIT
RIPAETIIRL AREIGSVKPA FIAQGWGPQR RANGELTSRA IAMLPILTGN VGIHGGNSGA
RESSYGTAFV RMPTLTNPVK TSISMFMWTD AIERGPEMTA LKDGVRGKDK LDVPIKFIWN
YAGNCLINQH SQINRTHEIL QDDSKCEMIV VIDNHMTASA KYADILLPDC TAAEQMDFCL
DASCGNMAYV IFADRVIAPR FECRTIYDML TDLSRRLGVE QAFTEGRTQE QWMRYLHQQS
RALMPALPEF DSFRQQGMYK ERDPNGHFVA YKAFRADPQA HPLTTPSGKI EIYSAALAAI
AGSWTLSPGD VIDPLPVYHA GFENYDDPLM RHYPLQLSGF HYKSRTHSTY GNVELLKAAC
PQEMWINPLD ARARGIASGD RVRIWNDRGQ VDVAAKVTPR IIPGVVALGE GAWYDPDARR
VDQSGCINVL TTQRPSPLAK GNPSHTNLVE VQKI
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