| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2245 |
|---|
| Symbol | pflA |
|---|
| ID | 8086632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 2642186 |
|---|
| End bp | 2642926 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644836322 |
|---|
| Product | pyruvate formate lyase-activating enzyme 1 |
|---|
| Protein accession | YP_002987854 |
|---|
| Protein GI | 242239673 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
|---|
| TIGRFAM ID | [TIGR02493] pyruvate formate-lyase 1-activating enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTTA TTGGTCGCAT TCACTCCTTT GAATCCTGCG GTACCGTCGA CGGCCCCGGC
ATCCGATTCA TCGCCTTCTT TCAGGGCTGC CTGATGCGTT GTCTCTACTG CCACAACCGG
GACACCTGGG ATACTCACGG CGGTCGGGAA ATCACGGTGG AAGAGCTGAT GAAGGAAGTG
GTGACGTACC GCCATTTCAT GAATGCGTCC GGCGGCGGCG TTACCGCATC CGGCGGCGAA
GCCATTTTGC AGGCGGAGTT TGTGCGCGAC TGGTTCCGCG CCTGCCATGA GCAAGGGATC
AATACTTGCC TCGACACCAA CGGCTTCGTG CGCCGTTACG ACCCGGTTAT TGATGAACTG
CTGGATGTCA CCGATCTGGT CATGCTGGAT CTGAAACAGC TCAATGATGA TATCCACCAG
AATCTGGTCG GCGTATCCAA CCACCGTACA CTGGAATTCG CCCGCTATCT GGCCACACGC
AATCAGCGCG TCTGGATCCG TTACGTCGTC GTCCCCGGCT GGACGGATGA TGACGCCTCC
GCCCATCTGC TGGGGGAATT TACCAAAAAC ATGAGCAATA TCGAGAAAAT CGAACTGCTG
CCCTACCATG AACTGGGCAA GCACAAATGG ACTGCCATGG GTGAGGAGTA CAAGCTGGAC
GGTATCAAAC CGCCCAAAGC CGATATTATG GATCGCGTAA AATCCATTAT CGCCGGCTAC
GGCCATAAAG TGGTTTACTG A
|
|---|
| Protein sequence | MSVIGRIHSF ESCGTVDGPG IRFIAFFQGC LMRCLYCHNR DTWDTHGGRE ITVEELMKEV
VTYRHFMNAS GGGVTASGGE AILQAEFVRD WFRACHEQGI NTCLDTNGFV RRYDPVIDEL
LDVTDLVMLD LKQLNDDIHQ NLVGVSNHRT LEFARYLATR NQRVWIRYVV VPGWTDDDAS
AHLLGEFTKN MSNIEKIELL PYHELGKHKW TAMGEEYKLD GIKPPKADIM DRVKSIIAGY
GHKVVY
|
|---|
| |