| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2196 |
|---|
| Symbol | |
|---|
| ID | 8086583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 2583482 |
|---|
| End bp | 2585152 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644836273 |
|---|
| Product | multicopper oxidase |
|---|
| Protein accession | YP_002987805 |
|---|
| Protein GI | 242239624 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2132] Putative multicopper oxidases |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCGTC GCGACTTTCT GAAATATACC GCCCTGCTTG GCGCTGCCAG CGCGCTGCCA
GGGTGGATCG GCCGGGCATG GGCGGCAGCA CCGGTGGCGT TGCCCATTCC GCCGTTGTTA
AAACCGGATG CCGCCGGGCA TATCGCTCTG CACATTCAGG CTGGCGTGAT GCGCTGGTTG
CCGGGCATAG ACACGACGAC CTGGGGCATC AACGGCCCAT TGCTGGGGCC GGCGTTGCAA
CTGGAGCAGG GGCAGTCGGT CTCGGTAACA GTGACCAACC GGTTAGCTGA AACCACCACC
GTGCACTGGC ACGGCATGGA AGTTCCGGGC GACGCCGACG GCGGCCCGCA GGCGACGATC
GCCCCTGGCG CTAGCTGGGA TGCGCGCTTT ACGGTCGACC AGCCCGCGAC GACCGCCTGG
TTTCATCCGC ATACGCACGG CGTCACCGGG CGTCAGGTGG CGATGGGGCT CGGTGGGCTG
ATTTTGGTGC AGGATGCCCC CAGCCGTGCC TTGCCGCTCC CCAATCAATG GGGGGTGAAT
GATATTCCTT TGATTTTGCA GGATAAACGG CTGAACGCTA GCGGCCAGAT TGACTATCAA
CTGGATGTGA TGACGGCGGC GGTGGGTTGG TTCGGCGATC GTATGTTGAC CAACGGCGTT
GTCGCACCAC AGCATATCGC GCCGCGTGGC TGGTTGCGCC TGCGCGTGCT GAACGGCTGC
AACGCCCGCT CGTTGACGTT GGCGGCCAGC GATGGCCGAA CACTGTATGT GATTGGTAGC
GACGGCGGCC TGCTGGCGGA ACCGGTGGCG GTGCAGCAGT TGCCGATGCT GATGGGGGAA
CGCTTCGAGG TGTTGGTGGA CGTGCGCGAC GGCAAACCGT TTGATGTGGT GACGCTGCCG
GTTAGCCAGA TGGGGATGCT GCTGCCGCCG TTCGATCAGC CTTTGCCGGT GTTGCATATC
CAGCCGGGAA CGGAAATGGG TGCTGGAACG CTGCCGGATC GGCTGGCGAC GCTGCCGCCG
TTGCCTGCGA CGGATGGGCT GAAATGGCGT CGATTGCAAT TGTCGATGGA TCCCCAATTG
GATAGGCAAG GCATGCAACT GCTGATGCAA CGCTATGGCA TGCAGGCGAT GGCCGGCATG
ATGATGGGGG GCAACGGCGC GATGACGGGC ATGTCACACG GAAATATGCC GCATGGGAAC
GGCGCCATGC CGATGTCGTC GCCGAGCGGT ATGAATCACG GCAACATGAA CCACAGCGGT
ATGAATCATG GCGGCATGGC GACGCCGGCA CCGAGTGGAA CATCGTCGAG CGCCGGCGGG
CTGGACATCA TGACCAGTAA TCGCATCAAC GGCGTCGCGT TCGAGATGGG CAAACCGTTG
TTTGACGTCA AACGCGGCGA GGAGGAGGTC TGGGAGATCT CCGGTCAGGG CGACATGATG
TTGCACCCGT TCCATATTCA CGGTACGCGG TTTCGTATCC TGTCGGAAAA CGGCGCTGCG
CCTGCCGCGC ATCGGCAAGG GTGGAAGGAC ACCGTGCGGG TGGAAGGCGG CGTCAGCCGG
GTGTTGGTGC GGTTCAATCA CCTGGCGCCG GCGCAACGGG CCTATATGGC CCACTGCCAT
CTGCTGGAGC ACGAAGATAC CGGCATGATG ATGGCGTTTA CCGTGTCGTA G
|
|---|
| Protein sequence | MYRRDFLKYT ALLGAASALP GWIGRAWAAA PVALPIPPLL KPDAAGHIAL HIQAGVMRWL
PGIDTTTWGI NGPLLGPALQ LEQGQSVSVT VTNRLAETTT VHWHGMEVPG DADGGPQATI
APGASWDARF TVDQPATTAW FHPHTHGVTG RQVAMGLGGL ILVQDAPSRA LPLPNQWGVN
DIPLILQDKR LNASGQIDYQ LDVMTAAVGW FGDRMLTNGV VAPQHIAPRG WLRLRVLNGC
NARSLTLAAS DGRTLYVIGS DGGLLAEPVA VQQLPMLMGE RFEVLVDVRD GKPFDVVTLP
VSQMGMLLPP FDQPLPVLHI QPGTEMGAGT LPDRLATLPP LPATDGLKWR RLQLSMDPQL
DRQGMQLLMQ RYGMQAMAGM MMGGNGAMTG MSHGNMPHGN GAMPMSSPSG MNHGNMNHSG
MNHGGMATPA PSGTSSSAGG LDIMTSNRIN GVAFEMGKPL FDVKRGEEEV WEISGQGDMM
LHPFHIHGTR FRILSENGAA PAAHRQGWKD TVRVEGGVSR VLVRFNHLAP AQRAYMAHCH
LLEHEDTGMM MAFTVS
|
|---|
| |