Gene Dd703_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2162 
Symbol 
ID8086548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2550111 
End bp2551355 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content47% 
IMG OID644836238 
Producthypothetical protein 
Protein accessionYP_002987771 
Protein GI242239590 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.337945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TGGCGGTGGT CGATGGTTTT TCATCGGGAA AATTTATTGC TAAAGAATTA 
CACCATAGAG GCTGTGAGCT GGTTCATATT TCATCCAGCG CGCAGCTGGA TGATTATTAT
TATAATGGTT TTGATTTTTC TATTTATGAA AACGCACTGG TTCATGATGT TATGGATCAA
ACGCTGGCCT TTATTAAGAA ATTCGGCGCC GAGGTTATTA TCGCTGGCGC TGAAAGCGGC
GTGATGTTAG CAGACCAATT AAATCATGCG TTGGCGCTGC CTTATCAAAA TGATTTTGCC
AAAACGTCGG CGCGACGCAA TAAATTCGAT ATGATCGAAA CACTCCGGGC GGGCGGCCTG
AAAGCGGCGC AGCAAATAGC CGTCAGTACA TGGCAAGATG CACAAGCATG GCTTGATGCT
CAACATTATC CGGTCGTGTT AAAACCGCTG GAAAGTGCAG GTTCGGACGG CGTGTTTATT
TGTAATAGCC GTGAAGAGAC ACAACGCGCA TTTGAGCAAA TATCCAAAAA GAAAAATAAG
CTTAATATTA TTAATGAGGC AGTTCTTTTT CAGGAATATC TGAAGGGGAC TGAATATGTG
GTGAATTTTG TGTCGCTCGC CGGGAATATT CTGGTGACGG AAATGGTTAA GTATCATAAG
AAAAAGCTGG ATTCAGGCAA TATTGTTTAC GATATCGATG AAATTATTGA TGCGTCTTAT
CCGGAATTCA ACGCGCTGGC GGACTATACC CGAGGTGTGT GCGCGTGTCT GGGGATTAAA
AACGGCCCCA GCCATGCCGA AGTCATGCTA ACGGCCGATG GGCCTTGTCT GGTTGAAATT
GCGGCCAGAA GCGACGGCAT CTTACGGCCC GATGTCGCGT GCGTCACCAC GGGGCTTGGT
CAACTCCTCG CAACCGCGAT AGCGATTACC GACCCTGAAA AATTTATGGC GCTGACGGTT
GCGCCCTATT ATCGGCTGAA AAACCATTCC TTTAATGTCT GCCTGATCAG CCCTGAACAG
GCTGTTTTCG CACCGGATGG GTTTGTGTCG CAGTTGCAGA CATTGGGCTC GTTCAAAAAA
GTGGAAATGT ATGTCGCTGA CGGCAATAAC GTCGAGCAGA CTAAAGATGT TTTCAGCCAG
CCTGGCACCG TCTACTTAGT CAGCCACCAA AAAGAGCAAC TCTGGCAGGA TTACGCAACC
ATTCGCGGGC TGGAATCCGC CGGGGCTTAT TATCAACACG CCTGA
 
Protein sequence
MKKVAVVDGF SSGKFIAKEL HHRGCELVHI SSSAQLDDYY YNGFDFSIYE NALVHDVMDQ 
TLAFIKKFGA EVIIAGAESG VMLADQLNHA LALPYQNDFA KTSARRNKFD MIETLRAGGL
KAAQQIAVST WQDAQAWLDA QHYPVVLKPL ESAGSDGVFI CNSREETQRA FEQISKKKNK
LNIINEAVLF QEYLKGTEYV VNFVSLAGNI LVTEMVKYHK KKLDSGNIVY DIDEIIDASY
PEFNALADYT RGVCACLGIK NGPSHAEVML TADGPCLVEI AARSDGILRP DVACVTTGLG
QLLATAIAIT DPEKFMALTV APYYRLKNHS FNVCLISPEQ AVFAPDGFVS QLQTLGSFKK
VEMYVADGNN VEQTKDVFSQ PGTVYLVSHQ KEQLWQDYAT IRGLESAGAY YQHA