Gene Dd703_2148 details

Gene Information

• Locus tag: Dd703_2148
• ID: 8086534
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: -
• Start bp: 2534881
• End bp: 2536890
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644836224
• Product: transketolase
• Protein accession: YP_002987757
• Protein GI: 242239576
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCACT CTGATTACAC CGCACGGCCA TTAGCCAATG CGGTTCGCGC ACTGAGTATG 
GACGCGGTAC AGCAGGCCAA TTCCGGCCAC CCCGGCGCGC CGATGGGCAT GGCGGATATG 
GCCACCGTGC TGTGGCGCGA GTTTCTGCAC CATAACCCCG CCAACCCCGA TTGGCCTAAC 
CGCGACCGGT TTGTGCTCTC CAACGGCCAC GCCTCGATGC TGCTTTACAG CCTGCTGCAT 
CTGACCGGCT ATGCGCTACC GCTGGAGGAG CTGAAAAATT TCCGGCAGAT GCACAGCAAA 
ACGCCGGGAC ACCCGGAGGT GGACGTCACG CCCGGCGTGG AAACCACAAC CGGGCCGTTG 
GGGCAGGGCA TCGCCAACGC CGTCGGGATG GCGCTGGCCG AACGTACTCT GGCGGCGCAG 
TTCAACCGGC CGGGGCATAC CCTGGTCGAC CACTACACCT ATGTGTTTCT GGGCGACGGT 
TGCATGATGG AGGGCATTTC CCACGAGGTG TGCTCGCTGG CGGGGACGCT GAAGCTAGGC 
AAGCTGGTGG CGTTTTACGA CGACAACGGC ATCTCCATCG ATGGTCATGT CGACGGTTGG 
TTTACCGACG ACACCGCCGC CCGGTTTGAG GCTTACGGTT GGCATGTAGT GCGCGGCATT 
GACGGGCACG ACGAGGCGGC GATCCGTGCG GCGATCAACG CCGCGCGCGC AGTCGGCGAT 
AAGCCGTCGC TGCTGATGTG CAAAACCGTG ATTGGCTTCG GTTCGCCCAA CAAGGCCGGC 
AGCCACGAGT CCCACGGCGC GCCGCTGGGG CCTGCGGAGG TGGCGGCGGC CCGCGAAGCG 
CTGGGCTGGC CATACCCGCC GTTCGTGATC CCGCCGGAAA TCCGTGCGCA GTGGGATGCG 
CGGGAGGTTG GTCAGGCAAG GGAAAACGCC TGGGCGGCGC GGTTTGCGGA TTATGCGCGC 
GCGTTTCCCG CGCTGGCGGC GGCGTTTACC CGCCGTATGC GCGGCGAGTT GCCGTCAACA 
TTCGCGGATG ACGCGCAGGC GTTCATCGCC GGCTTGCAGG CTAACCCGGC GGAGATTGCC 
AGCCGCAAGG CCTCGCAGAA CGCCCTGAAT GCCTTTGGCC CGCTGTTGCC GGAGCTGGTG 
GGCGGCTCCG CCGATCTGGC GCCGAGCAAC CTGACGCTGT GGTCCGGCTC CCGGCCGTTG 
AATGAAGATC CGGCCGGCAA CTATGTGCAC TACGGCGTGC GGGAGTTCGG CATGACCGCC 
ATCGCCAATG GGATGGCGTT GCACGGCGGT TTCCTGCCGT ATACCGCCAC CTTCCTGATG 
TTCGTCGAAT ACGCCCGTAA CGCGGTGCGC ATGGCGGCGC TGATGAAGCA ACGTCAGGTG 
CTGGTCTACA CCCACGACTC TATCGGGCTC GGGGAGGATG GCCCGACCCA CCAGCCGGTG 
GAACAGCTGG CGATGCTGCG GGTGACGCCG AATCTCAGCG TGTGGCGCCC GTGCGATCAG 
GTGGAAACCG CGGTGGCCTG GCAACAGGCG GTGCAGCGGC ATGACGGCCC GACGGCGCTG 
ATCTTGTCGC GCCAGAATCT GGCGCAACAG CCGCGCAACG ACGCGCAACT GGCGGCGATC 
GCGCGGGGCG GCTATGTATT GAAAGACGGT ACGCTGCCGC CCAGGCTGAT TGTGATCGCC 
ACCGGGTCGG AAGTCGCGCT GGCGGTGGCC GCGTGGGAAG TGCTGTCGGC GCGCGGGGTG 
GCGGTTCGGG TGGTGTCGAT GCCGTCTTGC GACGTGTTCG ACCAGCAGGA TGCCGCTTAC 
CGCGAAGCGG TGCTGCCCTC AGCGGTAAGC GCACGCATCG CGGTCGAGGC GAGCATCGCC 
GACTACTGGT ACAAGTATGT CGGGTTGCAC GGCGCCGTGG TGGGGATGCG CGACTTCGGT 
GAATCGGCCC CGGCCGGGCA ACTGTTTGCG CGCTATGGCT TTACCCTCGA CAACCTGCTG 
CATCAGGCGG AAGCGCTGCT GGCGCGCTAA 

 

Protein sequence

MTHSDYTARP LANAVRALSM DAVQQANSGH PGAPMGMADM ATVLWREFLH HNPANPDWPN 
RDRFVLSNGH ASMLLYSLLH LTGYALPLEE LKNFRQMHSK TPGHPEVDVT PGVETTTGPL 
GQGIANAVGM ALAERTLAAQ FNRPGHTLVD HYTYVFLGDG CMMEGISHEV CSLAGTLKLG 
KLVAFYDDNG ISIDGHVDGW FTDDTAARFE AYGWHVVRGI DGHDEAAIRA AINAARAVGD 
KPSLLMCKTV IGFGSPNKAG SHESHGAPLG PAEVAAAREA LGWPYPPFVI PPEIRAQWDA 
REVGQARENA WAARFADYAR AFPALAAAFT RRMRGELPST FADDAQAFIA GLQANPAEIA 
SRKASQNALN AFGPLLPELV GGSADLAPSN LTLWSGSRPL NEDPAGNYVH YGVREFGMTA 
IANGMALHGG FLPYTATFLM FVEYARNAVR MAALMKQRQV LVYTHDSIGL GEDGPTHQPV 
EQLAMLRVTP NLSVWRPCDQ VETAVAWQQA VQRHDGPTAL ILSRQNLAQQ PRNDAQLAAI 
ARGGYVLKDG TLPPRLIVIA TGSEVALAVA AWEVLSARGV AVRVVSMPSC DVFDQQDAAY 
REAVLPSAVS ARIAVEASIA DYWYKYVGLH GAVVGMRDFG ESAPAGQLFA RYGFTLDNLL 
HQAEALLAR