Gene Dd703_2115 details

Gene Information

• Locus tag: Dd703_2115
• ID: 8088282
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 2498328
• End bp: 2500214
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 644836191
• Product: Protein of unknown function DUF1800
• Protein accession: YP_002987724
• Protein GI: 242239543
• COG category: [S] Function unknown
• COG ID: [COG5267] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.034935
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTTGG TACCCTGGTG GGCGTTGCTG CGCACTTTCC ATCTTGCGGC GCCGGCCGCG 
CTGTTGCTGT CGAGCGCCGC TCAGGCGCTG ACACCGGACG ACGCCGCGCA TTTGCTCGGA 
CGCACCAGCT TCGGCGCCGA CACGCAGGAG ATGGCCGCTT ACCTGCCGCT GACCCGCGAA 
CAGGCGGTAG AGCGTCTACT CGATTCGCTC ACCGCGCCTC CCTATTTGCA GCCGCCGCGT 
TTCGTTTCTC AACCGCGACC CAATTACTGG GGCCATAACT GGGAAAGCAA CGAGGTTATT 
TTTTACCGCA TCAATGAAAT TCAGCAGTTA CAGAGCGGGT GGATGCAGGA AATGATCGAA 
ACCCCAACGC CGTTTGCCGA TCGGCTGGCG TTGTTCTGGC ACGGCCATTT CGTCTCCCGC 
TTTCAAAACA CCCGCATTTC CGCGCCCTTC TACGATCAAC TACAGGTATT TCGCCAGTGG 
GGCGGTCGCA ATTTTCGCGA GCTACTGCGG GCAATCTTGC GGGATCCGAT GATGTTGAGC 
GGCCTGGACA ATGTCCAAAA TACGCGCTCG CACCCTAACG AAAACCTGGC CAGAGAGCTG 
ATGGAACTGT TCACGTTGGG CGTGGGAAAC TACACCGAGC AGGATGTTAA AACGGTAGCC 
CGGCTGCTGG CCGGCCATTC CGTGGAGAGA GAAAACGGCT GGCGTTACCG GCTGAACGAG 
GCCGACGCCG ACAGCGGAGA AAAAACCATT CTGGGCCGGA CTCTCGCCGC CGGCAAAACC 
GACGCCATCG ACGATCTGGT GGATATTTTG CTGGCACAAC CGCAAACGGC GGAATTCATC 
GCCAAAAAAT TCTTCCTCGA CTTCGTCGCG CCACAGCCCG ACCCGCAAGA GATCACCCGT 
CTGGCGGCCA TCCTGCGTGA TAGCGACTAT GATCTGACGG TGTTCCTGCG TGCGCTCTTG 
TCCAGCGACG CATTCTGGCG GCCCCAGAAC CGTCTCAGCC TGATCAAATC GCCGCTGGAG 
CTGATCGTCG GTTTCGCCCG CACCACCCAG CTACGGATGC CGGACTACAA AATTCTGGTG 
GATTATGCCG ACATGCTCGG CCAGAGCGCC TTCATGGCGC CGGATGTCTC CGGCTGGAAA 
GGCGGCAACC ATTGGCTTTC CATCAGCAGC CTGGTCAACC GTGCGCGTGT TATGCGCCGC 
CTCTGGGTGG CGGTGGCGCA ATCACGCCAA TACCCGCCCG ACGTCACAGC CGGGCTCCGT 
CTGCGTTTCA GTTCGGAGTA CCGCGCCACG CCGGCACGTT TCACCGTCAA CATGGATGGC 
GTCCCCGTCG GCACCATTAC CGCCGCCGCC GGGCTCCGCA CTCTGGAGGA TGAGAAAGCC 
TCGAACGAAT CCGGCGCGTT GAAGCCTATG TGGGAAAACG CCGTCATCCC GTTGCCCGCG 
TTACCCGCCA ATCCACGTAG CATGACGATT GAATTTATTC CGCCGGATAC GGACACTCAC 
CTGTTCATTA ATTGGATCGC GTTAAACGGC CGACGCTACT CGCCCATGAA TGCTCGCTGG 
GTGGGTGCAG AGCGCGGCCG ATGCCCGACC GACGTACCGC GGGGCGCATT TTATTGCCCG 
GCAAAATTAC AGTTCGACCT GACGCCCATC GATAACGATC AGGCGACGCT GGCCGATCTG 
CACGCACCGC TCAACGCCAA CATCGAGTAC GGCACCGCCC ACCTGCAACT GACGCCGACG 
ACCGGCGACC GGCCGCATGG CCTGCCAGCA CGCGCGTCGG ACACCACACC GGCGCCGGTG 
CTGATACAGA CGGCGCAGGA CATTGACCGG CTCCGCGAAG AGGCCTTTCG CGCCTACACC 
TTCGATCCTG CTTATCACCT CAAATAG 

 

Protein sequence

MALVPWWALL RTFHLAAPAA LLLSSAAQAL TPDDAAHLLG RTSFGADTQE MAAYLPLTRE 
QAVERLLDSL TAPPYLQPPR FVSQPRPNYW GHNWESNEVI FYRINEIQQL QSGWMQEMIE 
TPTPFADRLA LFWHGHFVSR FQNTRISAPF YDQLQVFRQW GGRNFRELLR AILRDPMMLS 
GLDNVQNTRS HPNENLAREL MELFTLGVGN YTEQDVKTVA RLLAGHSVER ENGWRYRLNE 
ADADSGEKTI LGRTLAAGKT DAIDDLVDIL LAQPQTAEFI AKKFFLDFVA PQPDPQEITR 
LAAILRDSDY DLTVFLRALL SSDAFWRPQN RLSLIKSPLE LIVGFARTTQ LRMPDYKILV 
DYADMLGQSA FMAPDVSGWK GGNHWLSISS LVNRARVMRR LWVAVAQSRQ YPPDVTAGLR 
LRFSSEYRAT PARFTVNMDG VPVGTITAAA GLRTLEDEKA SNESGALKPM WENAVIPLPA 
LPANPRSMTI EFIPPDTDTH LFINWIALNG RRYSPMNARW VGAERGRCPT DVPRGAFYCP 
AKLQFDLTPI DNDQATLADL HAPLNANIEY GTAHLQLTPT TGDRPHGLPA RASDTTPAPV 
LIQTAQDIDR LREEAFRAYT FDPAYHLK