| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2107 |
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| Symbol | |
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| ID | 8088274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 2490854 |
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| End bp | 2492707 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644836183 |
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| Product | diguanylate cyclase with PAS/PAC and GAF sensors |
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| Protein accession | YP_002987716 |
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| Protein GI | 242239535 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00105125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCCCT TACGCCACCG TAGCGATAAA CATCAACAGC GCGTCCTTGC GCGTATGCTG
AAAATTTTTG AGTCTCAGCC GGCCGAAGAA CTGCAACGGC TCATTCGTAT CGTTCAATCC
TATTTCCAGG TAAAAAGCGT AGTGATCTCA CTGTTAGACG ACCATCGGCA ATGGTTCCTG
TATCACTGCA ACTTTTCACT GCCCGAACCG CCGATCAACC ATTCCTTCTG CGTCCACACC
GTCGACGGCG ATGCGCCGCT GATCGTCCCC GACACATTGG AAGACCGGCG TTTCGCCAAC
AACCCTCTCG TCACCGGGGA ACCGCGGGTA CGTTTTCATG CCAGCTACCC GCTCCACCTA
TCGACAGGCA AAGCGTTCGG TGCGTTATGC CTGTATCACG ATCAACCGCG ACTATTCAGC
CCGCCTGATC TAGAGCAATT GGGCGACCTG GCTTTCATCG TGCAAACCAC CCTGCAAAAG
GTAGAAATGC AGGCAAACGC CGAACTGGTG CGGGAAAAAT TCCAACACAT GGAATCCATC
AATCAGCAGA TATTCTCCCG TGCTGCGGTA GGACTGGCGT TGATCATGCC AGACATGAAA
CCAGTAAAAA TCAACGCCGC ACTCTGTAAC ATACTGGGAT ACAGCGAGGA GCTACTGTTG
ACGCTCCCGG TGGAACAGGT CGTCTATCCG GACGATCTCC CGGCGCTTAT CGCCACCCAC
CAACGGCTGC TCTCGGGAGA AATATCCCAG GATATGGCGC AACGGCGTTA TTTCCGCGCA
GACGGCAGCG TCATCTGGAT GCTGGTCTCC ATTTCCGCGC TCTACAATCC GAACGGCAGC
ATCTTCGGGC TGCAGGTGGC GCTGCACGAT CTCAGCCAAT TAAAAGCCAC CGAACAGGCG
CTGCGTGAAC TGAGTCAGGA GCTTGAACAG CGCGTAGAAC AGCGAACGCA GGAGCTCATG
CTTAGCCATC AATTCATCCA AGACATCACC GATCATATCC CGGCATTGGT CTCCTGCATC
AGCCCGGATA ACCACTTCAC GTTTACCAAC CGCCATTTGC GTAAACTGCT GGGCGACGAG
CAGCAGGATT ATTACCAGCA GGATATTCAC AACATCATGC AGCCGCCCGA GTTAGCACTA
TTTCTTCCCC GGCTGGAGGA GTCGCGGCAA AAACGGCTGC CGATGTCTTT CGAACACACC
GTACATACCC TGAACAACCA GTTTATTACC TACCATACCG AGCTGGTGCC CGCAGCCCGG
CCGGAGGATG GCACCTATAT TCTGTCAACC GACATCTCCC GATTGACGGC ACTGCGCGAC
AGGTTGGTGT TCGAAGCGAA TCACGACCAC CTCACCGGCC TGCCGAATCG CCGCGCCGTC
ATCAACCATC TGACGCGCAT CATCAACAAA AAGCACCGTA AACCCTTGGC GCTGTTATTT
TTCGACATCA ATAACTTCAA GCACTACAAC GATCAATTCG GGCATGGGTT CGGCGATCGG
GTGATCAAGG TTTTTGCCCG CCTGCTGCGC CGGAATACCC GTGCCTATGA CTTCATCGGG
CGCCTTTCCG GCGACGAATT TCTCATGGTC ATCCATGAGC AAAGCTGTCT GCCCAGAGAA
GTACAGATCA TCGGTGAAAA ATTGAAAAAT CGGATTGAAA AGCCGGTGAA AATCTTCAAT
CAAACCATCA CGCTGTCAGC CAGTATCGGT ACCGCTTTCC TGCCTCAAGG TGCAACGCTG
AACATCAACG AATTGATACG CCAGGCCGAC GCGGCCATGT ACGAGGATAA ACGGCGTTTC
CAGCGCCCAA TAAAGGAACC AGCCGACGAA CCGAACCGCG CCGAGAAAGA ATAG
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| Protein sequence | MSPLRHRSDK HQQRVLARML KIFESQPAEE LQRLIRIVQS YFQVKSVVIS LLDDHRQWFL
YHCNFSLPEP PINHSFCVHT VDGDAPLIVP DTLEDRRFAN NPLVTGEPRV RFHASYPLHL
STGKAFGALC LYHDQPRLFS PPDLEQLGDL AFIVQTTLQK VEMQANAELV REKFQHMESI
NQQIFSRAAV GLALIMPDMK PVKINAALCN ILGYSEELLL TLPVEQVVYP DDLPALIATH
QRLLSGEISQ DMAQRRYFRA DGSVIWMLVS ISALYNPNGS IFGLQVALHD LSQLKATEQA
LRELSQELEQ RVEQRTQELM LSHQFIQDIT DHIPALVSCI SPDNHFTFTN RHLRKLLGDE
QQDYYQQDIH NIMQPPELAL FLPRLEESRQ KRLPMSFEHT VHTLNNQFIT YHTELVPAAR
PEDGTYILST DISRLTALRD RLVFEANHDH LTGLPNRRAV INHLTRIINK KHRKPLALLF
FDINNFKHYN DQFGHGFGDR VIKVFARLLR RNTRAYDFIG RLSGDEFLMV IHEQSCLPRE
VQIIGEKLKN RIEKPVKIFN QTITLSASIG TAFLPQGATL NINELIRQAD AAMYEDKRRF
QRPIKEPADE PNRAEKE
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