Gene Dd703_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2103 
Symbol 
ID8088270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2486138 
End bp2488351 
Gene Length2214 bp 
Protein Length737 aa 
Translation table11 
GC content48% 
IMG OID644836179 
Producthypothetical protein 
Protein accessionYP_002987712 
Protein GI242239531 
COG category 
COG ID 
TIGRFAM ID[TIGR01760] phage tail tape measure protein, TP901 family, core region 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAC TCGCTAGCCT CAGTGGCTTG TTAACACAAG CCGCTCACAT CAGCGATCAG 
CTATACCTGG CCCAAACGGG TATGGCATCC GCCAATAAGG ATGAACGCTC GTTCAGTCAG
CGCATGGATG CGCTGGCTTC CCTCATCGAG GGGGCAGCCA AACAAACTGA TGATCTCGTT
GATTTAGCTA ATAAAACTAA AGACACGACG TTGGCTGGAA AAAAAGTCGT CCGCCGCTAT
CAGGCCATCA ACCGTCTGAA TAGAATGAAA ACGCCTGTTC CAGCTGACAA CGCCTCAACC
TCGTCATCAT CACCAGACCA GCCGCCCATA AAAAATGCGC CTCAGGCATC ACCCAAAACG
GGAAACTCAT CAGGGCGTAC CAAAGTCGCC CTCCGCTATC AGGCCATCAA ACGTCTGAAT
GAAATAAAAT CGCTGGTTCC GGCCGACAAC ACCTCAACCC CGTTATCATC ACCAGACCAG
CCGCCCATAA AAAATGCGCC TCAGGCATCA CCTAAAACGG GAAACCCTTC AGGGCGTATA
CTTGCTCAGG CGGGTAAATC TGGTGACATC GTCAAGGATT TTGGCAATAA AGGGGCCGAA
CTGACAAAGG GCTTACATCA AAAATACACC GAACTACGCA CCTTATTTAC GCCAGAGCAG
ACACTTCCTG CCTCTGTAAA TGATACGTCA ACGTTATCAA ACGCCTCGTC AGCATTAGCG
ACAACAGCCA TACAACCTGC AGTGCAACCC CAAATCCAAC AACCACTACC GTCAAATGAA
AACCCGTCGC CGAAATATGA CAGTGACACC AGTGTGATAA CAAATTCATT GCAGCAAGTC
AGATTGGCTT TTGCCCTACT GCGTGCGGAA CTGACTTACC TCAGTGACAC AATTGCAGGC
ACGTTGCAGT ACAGCAAAAC ATCCGTAGAT GATTTTCGCA CCACCTTATT AGCAGTGGAG
CCCGCGGCAA AGGCGGCTAA TCTGGCTGTT GCCCCAGCCA AAACCATACC CAACATATTC
CCCAACAATC AGGGGACAGA CGGCGGATCG AACCGCGCGC CAGACGCACA AAATAAGGCG
GCATCCACTG TATTGATGAA CAGTGATCAG CAAAACGCGC TCACGCAACA TGGCCTCACC
GCAGCACCGT CTACCGAACC AACGAACACC GCGTTGAATA TGCTAAAACC GGCGCTAACC
ATTAACTGCC TCTGTACCAG CGCACAACAA TCAGCCATTG ATGCTTCGGG CATCAGCGGT
TCTCAATCGG CGAATATTTC TGCGGGAAAT ACACTAGCCA GACAGGAAAG CAGTGCAAGT
AGCCTGAGTA AGGCCGCACA GCAATGTCAG GCCAGTTTGC AAAGTTGCAC TCAGACCGCT
CCAGGCTTGC TTGATACGAT TGATAGTGTA CTAAGTACCA GCGAAAATAT TTTTTCCGTA
ATAGGTTCTA TCGGTTCATT CGTCTCTATC GTGGCGGGTA ACGTAGGCAA TCTTATTGCT
ATTTTTGAGT TCCTCTCACC CCTATTTATG GTGATCGGCG GTACGATTAT TTCTGCAATA
TCGGCAATCA GTTTACCCAT TATTGGTATT ATCGCACTGG TCGCGGCAGG GGCAGCCTTA
ATTTATAAGT ATTGGCAACC TATTGGTGCT TTTCTTTCCG GTGTTTTTGA TGGGTTCGTT
GCAGCATTTT CCCCGCTTCA GGGGGTGTTT GAACAACTTA GAATTCCATT CGACGCATTA
TTTAAGTTGG TTGGTGGTCT GTTTAATTAT TTCAAGGATC TGATTTCCCC CATCAAAATG
TCTCAGGAAC AGTTGGGGGA GTTCAGGCAA GCCGGTGAGA TAGTAGGGAG AGTGTTAGGC
GACATATTGA TGGCGCCCAT TAATGCGATC AAATGGATAC TGGATAAAAT TGAAATAACT
AAAAACGCAT TACTTTGGTT AGCAGGGAAA AGCGCTACCA AAGCAGAAGA TAAACCGGAA
TTACCGCTAC CTGATGGAGA GCGAATTGTT CCAAACTACA ATGCAATCAC CTCCGGGAAT
AATAGCAAGA GCTACAGTGA CAATAGCGTC ATCAATAATA ATATACAAAT CACGGTTCCA
CCGGGCTACA GTGACGAACA GGTCAAACAA CATATTAATT CCGCATTAAA TGACCAGGCA
CAACGGAAGC AAGACATGCA ATTAGGTTCA ATGAGCGCTG GATTGTTAGA TTGA
 
Protein sequence
MSKLASLSGL LTQAAHISDQ LYLAQTGMAS ANKDERSFSQ RMDALASLIE GAAKQTDDLV 
DLANKTKDTT LAGKKVVRRY QAINRLNRMK TPVPADNAST SSSSPDQPPI KNAPQASPKT
GNSSGRTKVA LRYQAIKRLN EIKSLVPADN TSTPLSSPDQ PPIKNAPQAS PKTGNPSGRI
LAQAGKSGDI VKDFGNKGAE LTKGLHQKYT ELRTLFTPEQ TLPASVNDTS TLSNASSALA
TTAIQPAVQP QIQQPLPSNE NPSPKYDSDT SVITNSLQQV RLAFALLRAE LTYLSDTIAG
TLQYSKTSVD DFRTTLLAVE PAAKAANLAV APAKTIPNIF PNNQGTDGGS NRAPDAQNKA
ASTVLMNSDQ QNALTQHGLT AAPSTEPTNT ALNMLKPALT INCLCTSAQQ SAIDASGISG
SQSANISAGN TLARQESSAS SLSKAAQQCQ ASLQSCTQTA PGLLDTIDSV LSTSENIFSV
IGSIGSFVSI VAGNVGNLIA IFEFLSPLFM VIGGTIISAI SAISLPIIGI IALVAAGAAL
IYKYWQPIGA FLSGVFDGFV AAFSPLQGVF EQLRIPFDAL FKLVGGLFNY FKDLISPIKM
SQEQLGEFRQ AGEIVGRVLG DILMAPINAI KWILDKIEIT KNALLWLAGK SATKAEDKPE
LPLPDGERIV PNYNAITSGN NSKSYSDNSV INNNIQITVP PGYSDEQVKQ HINSALNDQA
QRKQDMQLGS MSAGLLD