| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2079 |
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| Symbol | yebU |
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| ID | 8088246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 2464466 |
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| End bp | 2465911 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644836155 |
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| Product | rRNA (cytosine-C(5)-)-methyltransferase RsmF |
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| Protein accession | YP_002987688 |
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| Protein GI | 242239507 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00446] NOL1/NOP2/sun family putative RNA methylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTAAAC ACATTCCCGC CGCTCTCCCC GTCGAATTTC TTGCCGCCAT GCAGCACATC
ATGCCGGCGC ATTTATCCAT GGATGCGTTT GTTGCTGCCT GCCAACGCCC GCTGCGGCGC
AGTATCCGTG TTAATACGCT GAAGATCGGC GTCGCAGATT TCCTCGCGCT GGTCGAGCCC
TATGGTTGGC GGTTAGCGCC CATCCCTTGG TGCGACGAAG GTTTCTGGTT GCTCAATGCC
GACGAAGCCG TGCTGCGTCT GGGCAATGCG CTGGAACATC TCGGCGGGCT GTTTTATATC
CAGGAAGCCA GTTCCATGTT GCCGGTCAAT GCCTTGTTCC ACGGCGGTAT CACGCCAGAA
CGGGTACTGG ACATGGCGGC GGCGCCCGGT TCAAAAACCA CGCAGTTGGC GGCGCGAATG
CGCAATCAGG GCGGCATTGT CGCCAACGAA TATTCGTCAA GCCGGGTCAA GGTATTGCAC
GCCAATCTGC ACCGTTGCGG TGTCAGCAAT ACGGCGCTGA CGCATTTTGA CGGCCGCATC
TTCGGCGAGG TGCTACCGGA ACATTTCGAT GCGGTGCTGC TTGATGCCCC CTGTTCCGGC
GAAGGCGTTG TGCGCAAAGA TCCGGCCGCC ATGAGCCACT GGTCGCCGGA AAGCATTGTC
GATATCGCCG CGACGCAGCG GGAGTTGATT CTCAGCGCCT TTCACGCGCT CAAACCGGGC
GGCGTACTGA TTTACTCGAC CTGTACGCTG AATCATCAGG AAAATCAGGA TGTTTGCCGC
TGGCTGCTGA CCCAGTTTCC CCATGCCTGC GAAATCGAAC CGCTTGATAA CCTGTTTCCC
GAAGCCCACC ATGCCGCCAC CGCCGAAGGT TTTTTGCATG TTTTTCCGCA AATCTACGAC
AGTGAAGGTT TTTTCATTGC CCGTCTGCGT AAAACCGCCA GCGTTTCAGG GCTGCCGGAA
TCCGGCTATA AGGCCGGGAA GTTCCCTTTT TCCCCCATCA ACGCCAAAGA GGCGCGCCAG
CTCATCCAGA CGGCCCATCA TTTGGGGCTT GTCTGGTCGG AAGACGAGCT GCAGCTTTGG
CAGCGTGATG ACGAAATCTG GCTGTTCCCG GCACAGTTGC ACCCACTGTT TGGCCGAATC
CGCTTCTCAC GGCCAGGCAT TCGGCTGGCA GAACGCTTCG CCAAAGGCTA TCGCTGGCAA
CACGAGTCCG TTGTCGCGCT TGGCGACATA TCAAGCGCCA ACGCATTTAT GCTGGATGAT
GATAATGCGC GCGCTTGGTT TCAGGGCAAA GATCTCTACC CGGATGCGCT ACCGCCCCAT
GACGATATTC TGCTGGTCTG GCGGCAAACG CCACTTGGCC TGACCAAGCG CGTCGGCTCA
CGGCTGAAAA ACACATTGCC GCGCGATCTG GTGCGCGATG GCGCCAGCGC CGTCGGGCTG
CGCTAA
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| Protein sequence | MTKHIPAALP VEFLAAMQHI MPAHLSMDAF VAACQRPLRR SIRVNTLKIG VADFLALVEP
YGWRLAPIPW CDEGFWLLNA DEAVLRLGNA LEHLGGLFYI QEASSMLPVN ALFHGGITPE
RVLDMAAAPG SKTTQLAARM RNQGGIVANE YSSSRVKVLH ANLHRCGVSN TALTHFDGRI
FGEVLPEHFD AVLLDAPCSG EGVVRKDPAA MSHWSPESIV DIAATQRELI LSAFHALKPG
GVLIYSTCTL NHQENQDVCR WLLTQFPHAC EIEPLDNLFP EAHHAATAEG FLHVFPQIYD
SEGFFIARLR KTASVSGLPE SGYKAGKFPF SPINAKEARQ LIQTAHHLGL VWSEDELQLW
QRDDEIWLFP AQLHPLFGRI RFSRPGIRLA ERFAKGYRWQ HESVVALGDI SSANAFMLDD
DNARAWFQGK DLYPDALPPH DDILLVWRQT PLGLTKRVGS RLKNTLPRDL VRDGASAVGL
R
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