Gene Dd703_2077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2077 
Symbol 
ID8088244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2460472 
End bp2461755 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content57% 
IMG OID644836153 
Productintegral membrane protein, PqiA family 
Protein accessionYP_002987686 
Protein GI242239505 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID[TIGR00155] integral membrane protein, PqiA family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.626049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTT ATCACCTCTC GTCATCTACC GCACCGGAGA ACAACGTGAC TACGGCGTCA 
TCGCCTGCGC CCGGCATACG CCGACAGCGT TGCCCGCAGT GCGATCTGTT GTTTGCGCTT
CCCCGCCTGA AACGCAATCA GCACGCGCAC TGCCCCCGTT GCCAGGCGCA TATCGATTCA
GGACGAGACT GGTCCATCTC CCGGCTGGCC GCCATGGGCG CGGCGATGCT GGTGCTGATG
CCCTTTGCCT ACACCGAGCC GTTGCTCAAC ATCCAACTGC TGGGGGTTTC CATCAATGCC
AGCCTGCTGG AAGGCATCTG GCAGATGACG CGGCAAGGCC ACCCTTTCAC CGCCAGCATG
GTGATGTTCT GCACCATCGG CGCCCCCTTT ACGTTGGTGT GCGCCCTGCT TTATCTGTTT
TTCGCCCCCC GAATCGGCAT GAATCTGCGA CCGGTGCTGT TGCTGTTCGA ACGACTGAAA
GCCTGGATCA TGCTGGACGT GTATCTGGTG GGGCTGGCGG TGGCGGCCAT CAAAGTACGC
GAATTCTCCG ATGTCCAACC GGGCTACGGG TTGGCCGCCT TTCTGGCGCT GATGTTACTC
AGCCTGCTGA CGCTGATTCA TCTCAATCCG CAACAACTAT GGCGCCGCTT TTACCCACAG
CCACAAGCCG GTTCGTCGGA GACGGCGTCG ATCGTTTGCC TCTCCTGCTT GTTTACCGGA
ACGCCGGACA GCCGAGGACG CTGCCATCGC TGCCACGTCC CGCTGACCGC CCGGCGCTCT
CACAGCCTGC AAAAATCCTG GGCGGCGCTG ATCGCTTCGA TCATTCTGCT GTTCCCGGCC
AACCTGCTGC CCATATCCAT TATTTATGTC AACGGCAGCC GCAAGGAAGA CACCATTTTC
TCAGGCATCA TATCGCTGGC GAACGGTAAC GTTCCGGTCG CCATGGTGGT TTTTATCGCC
AGTATTCTGG TGCCGTTCAC CAAAGTATTG GTCACTGCGA CCCTGCTATT GAGTATTCAT
TTCAACGTCA GCCACAGTTT GATGACCAGA ATGCGGTTAT TGCGGGCCAT TGCCTGGGTC
GGTCGCTGGT CGATGCTCGA CTTGTTCGTG ATCGCCCTGA CCATGTCGCT GGTTAACCGC
GATCAATTGT TGGCTTTTAC TATGGGGCCC GCCGCCTTCT ATTTTGGGGC GGCGGTATTT
TTGACGATAT TGTCGGTCGA CTGGCTGGAT AGCCGACTGT TGTGGGACAA CAATGCAAGA
CCAAACGACG AAGACACCAA CTGA
 
Protein sequence
MKIYHLSSST APENNVTTAS SPAPGIRRQR CPQCDLLFAL PRLKRNQHAH CPRCQAHIDS 
GRDWSISRLA AMGAAMLVLM PFAYTEPLLN IQLLGVSINA SLLEGIWQMT RQGHPFTASM
VMFCTIGAPF TLVCALLYLF FAPRIGMNLR PVLLLFERLK AWIMLDVYLV GLAVAAIKVR
EFSDVQPGYG LAAFLALMLL SLLTLIHLNP QQLWRRFYPQ PQAGSSETAS IVCLSCLFTG
TPDSRGRCHR CHVPLTARRS HSLQKSWAAL IASIILLFPA NLLPISIIYV NGSRKEDTIF
SGIISLANGN VPVAMVVFIA SILVPFTKVL VTATLLLSIH FNVSHSLMTR MRLLRAIAWV
GRWSMLDLFV IALTMSLVNR DQLLAFTMGP AAFYFGAAVF LTILSVDWLD SRLLWDNNAR
PNDEDTN