Gene Dd703_2067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2067 
Symbol 
ID8088234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2448583 
End bp2450034 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content56% 
IMG OID644836144 
Productsensor protein PhoQ 
Protein accessionYP_002987677 
Protein GI242239496 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.194184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAAA AATCCCCGTT TTCACTCCGG TTCCGCTTTT TGATCGCCAC CGTGGCGATC 
GTGCTGGCCC TGTCGCTTTC CTACGGTATC GTCGCGGTCG TAGGCTATAG CGTCAGCTTT
GACAAAACCT CTTTTCGCCT GCTGCGCGGA GAAAGCAACC TGTTCTACAG CCTGGCGCAA
TGGCGCGACA ACCAGCTCAC CATCGCTACC CCGCCCGAAC TGGATATTAA CTATCCAACG
TTGGTGTTTA TCTACAACGA GCACGGCAAA CTGTTGTGGC GGGAACGCGC AGTGCCGGAA
TTGGAATCGC AGATCAAACC GGAATGGCTG GAAAAAACCG ACTACCACGA ATTAGACGCC
GACACGCGCA CCAGCAATGC GGTATTGCAG GGTAGCCCGC AGATACTGGA TAAACTCCAC
GCTTACAACA CGGAAGACAA AACGCCGTTT ACCCACTCCA TCGCCGTGAA CGTTTACCCT
GCCACCCCTC ATCTGCCCAA GTTGGTGATT GTGGTGGTAG ACCGGGTGCC GCAAGAATTA
CAACAGGCGG ATGTGGTCTG GGAATGGTTC CGCTACGTAT TTATCGCACA TCTGGCGTTG
GTACTGCCGT TGTTATGGCT GGCGGCGCAC TGGAGTTTAC GGCCGATCAA ACATCTGGTG
CGGCAAATCC GGGAGCTGGA AAACGGTTCT CGTGAGCATC TGGACGAGAA TCCGCCGCGG
GAACTGGCCA GTCTGGTGCG CAATCTGAAC ACGTTGCTGA ACAATGAACG CCAGCGTTAT
CACAAATATC GCACCACGCT CACCGACCTG ACCCACAGCC TTAAAACCCC GCTGGCGGTA
CTACAAACCA CGTTACGATC GCTGCGTACC GGCAAGGAGC TGACTATCGA ACAGGCCGAG
CCGATTATGC TGACGCAAAT TAGTCGCATC TCTCAGCAGA TCGGCTACTA CCTGCACCGC
GCCACCGTTC GCACCGAACA CCTGGTCATG CCCCGAGAAG TCCATTCGGT GCCCGCTCTG
CTGGATGCGT TGTGTTCCGC ACTCAACAAG GTCTATCAGC GCAAAGGGGT GGTACTGACC
ATGGATATCG CGCCCGAACT CACCTTTATC GGCGAGAAGA ACGACTTTAT GGAAGTGATG
GGCAACATCC TCGATAACGC CTGCAAGTAT TGCCTCGAGT TTGTCGAGAT CAGCGCCTGC
TATTCCGGCC AGAAACTACA CCTGGTGATT GACGATGACG GCCCCGGCAT CCCCGACAGT
AAACGGGACG TGATCTTCCA GCGCGGACAA CGCGCCGACA CCCTGCGTCC CGGTCAGGGG
ATCGGCTTGT CCGTGGCGGC GGAAATTATT GAGCAATATC AGGGGGAAAT CGCGATCGGC
AACAGCACGC TTGGCGGCGC GCGCGTCGAA GCCATTTTCG CCCGTCAGCA CCTTCATCAG
AACGATGTCT GA
 
Protein sequence
MAKKSPFSLR FRFLIATVAI VLALSLSYGI VAVVGYSVSF DKTSFRLLRG ESNLFYSLAQ 
WRDNQLTIAT PPELDINYPT LVFIYNEHGK LLWRERAVPE LESQIKPEWL EKTDYHELDA
DTRTSNAVLQ GSPQILDKLH AYNTEDKTPF THSIAVNVYP ATPHLPKLVI VVVDRVPQEL
QQADVVWEWF RYVFIAHLAL VLPLLWLAAH WSLRPIKHLV RQIRELENGS REHLDENPPR
ELASLVRNLN TLLNNERQRY HKYRTTLTDL THSLKTPLAV LQTTLRSLRT GKELTIEQAE
PIMLTQISRI SQQIGYYLHR ATVRTEHLVM PREVHSVPAL LDALCSALNK VYQRKGVVLT
MDIAPELTFI GEKNDFMEVM GNILDNACKY CLEFVEISAC YSGQKLHLVI DDDGPGIPDS
KRDVIFQRGQ RADTLRPGQG IGLSVAAEII EQYQGEIAIG NSTLGGARVE AIFARQHLHQ
NDV