| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2059 |
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| Symbol | |
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| ID | 8090656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 2438701 |
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| End bp | 2440857 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644836136 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_002987669 |
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| Protein GI | 242239488 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0475762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCGAG CCCCAACCAA TAATGACGAA AAAAACAGGC TTACGGCATT GAGTGAGTAT
GGCGTCAATG AACCGTTGTC TGATCCGGGT TTCGATAATC TGGTTCGTCT GGCGGCGAAT
GTGTTCAACG TCCCAATCGT GCAGATTTCT CTGCTGGAAG AAGAACGTTT ACTGTTTGCC
GCAAGTGTTG GCATATCCAC GCATGAAGCG ACACGGGAAG CGTCTTTTTG TACGTATGCG
ATTCTCCGAA AACGTATGTT GGTTGTTCCT GATGCCCGCA AAGATCCTCG TTTCAAGAAT
AACCCGATGG TAGTCGGTGA GCCGCATATT CGTTTTTACG CCGGAATTCC GTTACGTACA
GTAAGCGGAT ATCCGATCGG CGCTCTCAGT ATTATTGACA ACAAACCTCG CGCATCCTTG
AGTGCGCGTG ATGCGCACAA CCTGCAAGAC CTTGCCACGT TGGTTATGGA TCGTTTGGAA
ATGCGTCGTT TGGATCTGGC TCGGAAATCC AGTCAGGCGT GCTTTGAGTC CGTTTCAGAA
TCCTCTCCTG ATTCCGTATT GTGCGTAAAC GATAAAGGCA TCATTACCTA TTGGAATCAG
GCCGCGGAAA AATGCCTGGA ATACACCGGT GAGCAAATTA TCGGTGAGCA TATCAGCACT
ATTATTCCTG ATATGTTTGT AGTTCAACTG CATCATCTGG CAACGGACAA AGTTTCGTTG
TTCAGGAAAA GTGCGATGGA GCTTGAGGCC CGGACGTTAA GCGGCACGTT GGTGCCGGTT
GAGCTGTCGG TTTCCATGTG GCAAAACGAC AACCAAACCC GTTATGGGGC GATTCTGCGT
GATGTGACGG ATCGAAAACG TTATGAAGAG CGGCTGTTTC TGCAAGCGCA TCGCGATCCT
CTGACCGGTC TGGCAAACAG AACCCTGCTG GCTTCGACCC TGGATCACGT CTTGAAGAGT
GATCTGGCGG TAGCGGTACT GATCATCGAT CTGGATGGTT TCAAAGATAT CAACGATAGC
CTCGGTCATT CGAGTGGTGA TGAGATTCTT ACCAGCGTAG CCAAACGCTT ACAGGCGAAT
GCCCGGCCCG AGGATCTGGT CGCCCGGATG GGGGGCGATG AGTTTGCCAT GCTGTTGCCT
GGTTTGAATA CGGAAGAGCT GGTGGCGGAC TTAGCCGAGA GAATCATTAA TGATATTTCT
CAGGCGGTAC AAATCGATAA TCAACAAATC AATATCAGCG CCAGTATTGG TATTGTCATG
TCGCCTTCTC ACGGAATGAC TTCGCAAGAT TTGCTCACTA GCGCGGATCT GGCTCTTTAT
AAAGCCCAAT CTGACGGTCG TAACTGTTAT CGCTTTTTTA CCCGTGAATT GCGGGAAGTT
TTTCAAGCAC GGCATGCATT TCAGCTTGAG TTTATCAGGG CCTATGAGCA GAAGGAGTTC
GAAGTTTTTT ACCAGCCGCA AGTCAGTCTG ATCAGCAATA AGGTTGTTGG TGCGGAAGCC
TTGCTACGTT GGCGGCACCC CTACAAGGGA TTACTGACGC CGGCTGTGTT TCTTTCCGCT
TTGGAGCGGG GGCCTTGGGC CGAGCGCATT GGGGACTGGG TTGTTGAGAC GGCTTGTCAA
CAGGCGGCGG AATGGTACAA GGGTGGGGCT GAAAATTTCC GGATCAGTAT CAACCTGTTT
GCCGCGCAAT TCCGTTCCGG TATGTTGGCG CAGAAAATTC AATCAGTGTT GGCGAAATCA
GGGCTGAAGC CAAGTTCACT CGAACTGGAG ATTACGGAAA ATATTATTCT GCGCTATGAC
GAAAATATGC TGAAGCCGTT AAATGAATTA CGTAGCCTTG GTGTTGGCAT TGCATTTGAC
GATTATGGTA CGGGGTATGC TTCGTTAAGC ATGTTGAAAA ATTATCCGGT AACTCGGCTT
AAAATTGATC AGACATTTGT CAGAACAATG TGTGACTCAG CACCGGATGC AGCGATTGTC
AGGGCCATTT TGTATCTGGG TAAGAGTTTT GGTCTGGATG TTATCGCTGA AGGGGTGGAG
ACCGAAGAGC AATGTGAACG CTTGCGCAAT AAAGGGTGTG AACAGGCGCA AGGTTATCTT
TTTGGCCACC CGATGCCCTC TACTGAGTTT GAAAAGTTAC TCGATCTGGG TGGGTAG
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| Protein sequence | MSRAPTNNDE KNRLTALSEY GVNEPLSDPG FDNLVRLAAN VFNVPIVQIS LLEEERLLFA
ASVGISTHEA TREASFCTYA ILRKRMLVVP DARKDPRFKN NPMVVGEPHI RFYAGIPLRT
VSGYPIGALS IIDNKPRASL SARDAHNLQD LATLVMDRLE MRRLDLARKS SQACFESVSE
SSPDSVLCVN DKGIITYWNQ AAEKCLEYTG EQIIGEHIST IIPDMFVVQL HHLATDKVSL
FRKSAMELEA RTLSGTLVPV ELSVSMWQND NQTRYGAILR DVTDRKRYEE RLFLQAHRDP
LTGLANRTLL ASTLDHVLKS DLAVAVLIID LDGFKDINDS LGHSSGDEIL TSVAKRLQAN
ARPEDLVARM GGDEFAMLLP GLNTEELVAD LAERIINDIS QAVQIDNQQI NISASIGIVM
SPSHGMTSQD LLTSADLALY KAQSDGRNCY RFFTRELREV FQARHAFQLE FIRAYEQKEF
EVFYQPQVSL ISNKVVGAEA LLRWRHPYKG LLTPAVFLSA LERGPWAERI GDWVVETACQ
QAAEWYKGGA ENFRISINLF AAQFRSGMLA QKIQSVLAKS GLKPSSLELE ITENIILRYD
ENMLKPLNEL RSLGVGIAFD DYGTGYASLS MLKNYPVTRL KIDQTFVRTM CDSAPDAAIV
RAILYLGKSF GLDVIAEGVE TEEQCERLRN KGCEQAQGYL FGHPMPSTEF EKLLDLGG
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