Gene Dd703_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2019 
Symbol 
ID8090616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2397676 
End bp2399040 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content58% 
IMG OID644836098 
ProductL-serine dehydratase 1 
Protein accessionYP_002987631 
Protein GI242239450 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1760] L-serine deaminase 
TIGRFAM ID[TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAAGCG TATTCGACAT GTTCAAAATC GGTATTGGCC CCTCCAGTTC TCATACCGTC 
GGACCGATGA AAGCCGGTAA ACAATTTGTC GATCAACTGC AAGAGCAGGG ATTGCTTGAA
CGAACCGAGC GTATTTCCGT CGAGGTTTAT GGCTCTCTGG CCTTGACCGG CAAGGGCCAC
CATACCGATA TCGCCATTAT CCTCGGGCTG GCGGGCAACC AGCCGGATAC CGTGGATATT
GACGCCATTC CCACCTTTAT ACGTCAGGTT ACGCAATCAG AGCGCCTGAC GCTGGCAGGC
CATCGGGACG TTGCTTTCCC GCGCGAAGGC GGCATGGTTT TCCGTAGCGA AAACCTGCCA
TTACATGAAA ACGGCATGAC GCTGACCGCA TTTGCCGACG ACGGCCATCC ACTCTTTCGC
AACACCTATT ACTCCGTTGG CGGCGGTTTC ATTGTTGATG AAGCGCACTT CGGCCAAACC
CAGCCCGACA CCGTTAGCGT GCCGCACCCT TATCGCTCCG CCAAAGATAT CCTGGAGCAT
TGCCGCCAGA GCGGGTTGTC GATGTCCGGG ATGGTCATGT GCAACGAGCT GGCAATGCAC
AACCGGCAGG AGATTGAAGA CTATTTTGCT GCCGTCTGGC AGACCATGCG CAGTTGTATG
GATCGCGGGA TGAATACCGA AGGCGTTCTT CCCGGCCCAC TGCGGGTTCC TCGCCGGGCA
TCCTCCCTGC ACCGCATGCT GGTGGCTTCC GATAAACTGT CCAAGGATCC GATGAACGTG
GTCGACTGGG CCAATATGTT CGCACTGGCC GTCAGTGAAG AAAACGCGGC CGGCGGGCGT
GTCGTCACCG CACCGACCAA TGGCGCCTGC GGCATCGTTC CGGCCGTGCT GGCTTATTAC
GATCACTTTA TCGAGCCGGT TAGCCCCGGT ATCTATCTGC GCTATTTCAT GGCTGCCGGC
GCCATCGGCA CGCTCTACAA AATGAATGCG TCGATTTCCG GCGCGGAAGT CGGTTGTCAG
GGGGAGGTGG GCGTCGCGTG TTCGATGGCG GCGGCGGGCC TGGCTGAATT GATGGGTGCC
AGCCCGGAGC AAGTGTGTAT CGCCGCAGAG ATCGGTATGG AGCACAACCT TGGGCTGACC
TGCGATCCGG TCGCCGGCCA GGTACAGGTT CCCTGTATCG AACGCAACGC TATCGCCACC
GTCAAAGCGA TCAACGCATC CCGTATGGCC ATGCGCCGCA CATCCGAGCC GCGCGTGTCG
CTGGATAAAG TGATTGAAAC CATGTACGAA ACCGGGAAGG ACATGAACGC CAAATACCGG
GAAACGTCGC GCGGTGGTCT GGCGATCAAA GTACAGTGTG ATTAA
 
Protein sequence
MISVFDMFKI GIGPSSSHTV GPMKAGKQFV DQLQEQGLLE RTERISVEVY GSLALTGKGH 
HTDIAIILGL AGNQPDTVDI DAIPTFIRQV TQSERLTLAG HRDVAFPREG GMVFRSENLP
LHENGMTLTA FADDGHPLFR NTYYSVGGGF IVDEAHFGQT QPDTVSVPHP YRSAKDILEH
CRQSGLSMSG MVMCNELAMH NRQEIEDYFA AVWQTMRSCM DRGMNTEGVL PGPLRVPRRA
SSLHRMLVAS DKLSKDPMNV VDWANMFALA VSEENAAGGR VVTAPTNGAC GIVPAVLAYY
DHFIEPVSPG IYLRYFMAAG AIGTLYKMNA SISGAEVGCQ GEVGVACSMA AAGLAELMGA
SPEQVCIAAE IGMEHNLGLT CDPVAGQVQV PCIERNAIAT VKAINASRMA MRRTSEPRVS
LDKVIETMYE TGKDMNAKYR ETSRGGLAIK VQCD