| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1984 |
|---|
| Symbol | nhaB |
|---|
| ID | 8090581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 2356663 |
|---|
| End bp | 2358237 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644836063 |
|---|
| Product | sodium/proton antiporter |
|---|
| Protein accession | YP_002987596 |
|---|
| Protein GI | 242239415 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3067] Na+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00774] Na+/H+ antiporter NhaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.106188 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGACC TACCTGCTCA CCGTATTATC CTCAAAAATT TCCTTGGCAA TGCCCCCGAC
TGGTACAAGC TCGCCATACT CTCGTTCCTG ATTATCAACC CTTTGATTTT TCTATTCGTA
AGCCCACTTT TGGCAGGCTG GCTACTCGTC ATTGAGTTCA TATTTACTCT TGGCATGGCA
CTGAAATGCT ACCCCCTGCA ACCGGGTGGA TTACTCGCCC TGGAGGCTAT TTTCTCTGGC
ATGACCGCCC CAGATCAAGT ATGGCGTGAA ATCACAAATA ATATTGAAGT GTTATTATTG
CTGGTATTCA TGGTGGCAGG CATTTATTTC ATGAAACAGC TCTTACTGTT CGCCTTTACC
CGCCTACTCC TGAATATCCA CTCAAAAGTC AGATTATCTT TGGCTTTTTG TCTCGCCGCT
GCATTTCTTT CAGCATTTCT TGATGCCTTA ACAGTCATCG CTGTAATTAT CAGCGTTGCC
GTCGGCTTTT ATGAAATCTA TCACCGTTAT GCCTCGGCCC AAGGCGAACA TGTCGATATC
AGTGACGATA GCGCAATGCG AAGCGAGGAA CATCGTAAAG CACTGGAACA ATTCCGCGGA
TTCCTACGTA GTCTGCTAAT GCATGCGGGC GTCGGTACTG CATTGGGAGG GGTGATGACC
ATGGTTGGCG AGCCGCAAAA TCTGATCATC GCCAAAAGTG CTGGTTGGGA TTTCATCAAT
TTTTTCCTTC GCATGAGCGC CGTTACCGTA CCGGTTCTGA TATCCGGAAT AATTATTTGC
ATTATTGTCG AGCGCTATAA GTGGTTCGGT TACGGTATCA CTCTGCCAGC AGCGGTGCGC
AACGTTCTGG AAGAGTATGA CCATTCTGTG ACGGTCAAAC GCAGCCGACA GGAGAGAGCC
AAACTGGTCG TTCAGGCGAT TGTCGGCTTA TGGCTTATCA TTGCGTTGGC GTTCCATCTG
GCGGAAGTCG GGCTGATCGG ATTGTCGGTC ATCATTCTTA CGACATCATT CTGCGGCATT
ACTGATGAAC ACGCTCTCGG TAAATCTTTT CAGGAAGCGC TGCCATTTAC TGCCCTATTG
ACCGTTTTTT TCACCGTAGT CGCCGTGATT ATTGATCAAC ACCTGTTTAC TCCCATCATT
GAGTTTGTAT TACAAGCATC TGAACACTCT CAACTGGGAA TGTTCTATTT GTTTACCGGG
CTGCTATCTT CTATTTCGGA TAACGTTTTC GTCGGTTCCG TCTACATTAA TGAAGCACGC
AATGCTTATG TATCCGGCAA CATCAGTTTG CAACAGTATG AACTGTTGGC CGTGGCCATC
AACACCGGAA CCAATCTCCC CTCAGTCGCC ACCCCTAATG GGCAAGCGGC ATTTCTGTTT
CTGCTGACAT CAGCCGTTGC CCCCCTGATT CGTCTCTCAT ACGGCCGGAT GGTCTGGATG
GCGTTACCTT ATACCCTGGC CATGACACTC GTGGGACTAC TCTGCGTCGA ACTGACGCTG
GTACCATCCA CTGAATATTT ACAATCCATA CAGTGGTTGC AATTACCGGA GATTACACAC
GCTGCCGGGC ATTAA
|
|---|
| Protein sequence | MLDLPAHRII LKNFLGNAPD WYKLAILSFL IINPLIFLFV SPLLAGWLLV IEFIFTLGMA
LKCYPLQPGG LLALEAIFSG MTAPDQVWRE ITNNIEVLLL LVFMVAGIYF MKQLLLFAFT
RLLLNIHSKV RLSLAFCLAA AFLSAFLDAL TVIAVIISVA VGFYEIYHRY ASAQGEHVDI
SDDSAMRSEE HRKALEQFRG FLRSLLMHAG VGTALGGVMT MVGEPQNLII AKSAGWDFIN
FFLRMSAVTV PVLISGIIIC IIVERYKWFG YGITLPAAVR NVLEEYDHSV TVKRSRQERA
KLVVQAIVGL WLIIALAFHL AEVGLIGLSV IILTTSFCGI TDEHALGKSF QEALPFTALL
TVFFTVVAVI IDQHLFTPII EFVLQASEHS QLGMFYLFTG LLSSISDNVF VGSVYINEAR
NAYVSGNISL QQYELLAVAI NTGTNLPSVA TPNGQAAFLF LLTSAVAPLI RLSYGRMVWM
ALPYTLAMTL VGLLCVELTL VPSTEYLQSI QWLQLPEITH AAGH
|
|---|
| |