Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1983 |
Symbol | |
ID | 8090580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 2355712 |
End bp | 2356431 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644836062 |
Product | fatty acid metabolism regulator |
Protein accession | YP_002987595 |
Protein GI | 242239414 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | [TIGR02812] fatty acid metabolism transcriptional regulator FadR |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0199399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTATTA AGGCGCAAAG TCCGGCGGGA TTCGCGGAAG AGTATATTAT TGAAAGTATC TGGAATAATC GTTTTCCTCC TGGCTCCATT CTTCCGGCAG AACGAGAACT GTCCGAGTTG ATTGGCGTCA CCCGTACCAC GTTACGTGAG GTGCTACAGC GCCTTTCCCG TGATGGCTGG TTGACGATTC AGCATGGTAA GCCAACCAAA ATCAACAATT TTTGGGAAAC ATCAGGTCTC AATATTCTGG AGACACTGGC GCGGCTTGAT CATGATAGTG TTCCTCAACT GATAGATAAT CTGCTGGCGG TTCGCACGAA TATTGCCGGT ATTTTTATTC GCACGGCCGT TAGGCTTCAC CCTGCCAAAT CGGCAGAAAT ACTTAAGATA GCTGAATCTG TTCAGGATAC GTCCGATGCG TATGCCGAAC TGGATTACAA CATCTTCCGT GGATTGGCCT TTGCCTCCGG CAATCCGATT TACGGTTTGA TCATTAATGG CTTGAAAGGG CTTTATATCC GGGTTGGACG TTACTATTTT TCTAATCAGG ATGCACGTAA AGTGGCCTTG TCGTTCTATC GCCGTCTTGA GTCGCTGAGC CGGGAAGGAC TTTATGAACA AGTGCCTGAT GCTATTCGCC AATATGGTAA AGAGAGTGGT TCAATCTGGC ACGGAATGCA GAATGCCATT CCCAAAGATC TGGCGGAAGG CCGTCGCTAA
|
Protein sequence | MVIKAQSPAG FAEEYIIESI WNNRFPPGSI LPAERELSEL IGVTRTTLRE VLQRLSRDGW LTIQHGKPTK INNFWETSGL NILETLARLD HDSVPQLIDN LLAVRTNIAG IFIRTAVRLH PAKSAEILKI AESVQDTSDA YAELDYNIFR GLAFASGNPI YGLIINGLKG LYIRVGRYYF SNQDARKVAL SFYRRLESLS REGLYEQVPD AIRQYGKESG SIWHGMQNAI PKDLAEGRR
|
| |