| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1970 |
|---|
| Symbol | |
|---|
| ID | 8090567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 2341823 |
|---|
| End bp | 2342461 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644836049 |
|---|
| Product | nicotinamidase/pyrazinamidase |
|---|
| Protein accession | YP_002987582 |
|---|
| Protein GI | 242239401 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.348861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGG CTCTGCTCCT TATTGATGTG CAAAACGACT TCTGCCCCGG CGGCGCACTC
GCCGTCGCCG ACGGCGATCG CGTGGTCGAC GTTGCAAATC TGGCGATAGA CGCCGCGATA
AAAGCCAATA TCACCGTGAT TGCCAGCCAG GACTGGCATC CGGCGAATCA TCGCAGTTTT
GCCGTGAACT CAGGAACGGA GATCGGAGCA ATGGGCGATC TCGACGGGTT AACGCAAATT
TGGTGGCCGG TTCACTGTGT TCAAAACCAA CCTGGCGCGG AGTTTCATCC CCGACTGAAC
CAAAATGCGA TTGAATGGGT AGTGCGTAAA GGGGTTCAGC CTGATATCGA CAGCTACAGC
GCCTTTTTCG ACAACGGCCA CCGCGCCAGT ACCGGCTTGC ACGACTGGCT CCATCGCCGC
CGCATCACCC AATTAACCAT CATCGGGCTG GCGACAGATT ACTGTGTCAA ATATACCGTA
CTGGATGCTC TGGAATTGGG TTATCAAACC GAGGTACTGG TCGATGGTTG TCGCGGCGTC
AATCTGCACC CAAACGACAG CCAGAACGCG CTGAACGAGA TGTCGCAACG TGGCGCTACG
CTGATTGATT TGGCGCATTT CATCAATGCC CCCGCCTGA
|
|---|
| Protein sequence | MNKALLLIDV QNDFCPGGAL AVADGDRVVD VANLAIDAAI KANITVIASQ DWHPANHRSF
AVNSGTEIGA MGDLDGLTQI WWPVHCVQNQ PGAEFHPRLN QNAIEWVVRK GVQPDIDSYS
AFFDNGHRAS TGLHDWLHRR RITQLTIIGL ATDYCVKYTV LDALELGYQT EVLVDGCRGV
NLHPNDSQNA LNEMSQRGAT LIDLAHFINA PA
|
|---|
| |