Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1954 |
Symbol | |
ID | 8090550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 2320418 |
End bp | 2322061 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644836032 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_002987566 |
Protein GI | 242239385 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGACTA AAACAATTAA AAAGCGTTTG GCGATGGGAA TTGTCGCCGC ATTGACTGCG TCAGCAGGCG TCAACGCCTG GGCGGCTACC GTACCCGCCG GTGTGCAACT GGCAGAGAAG CAGGAGCTGG TACGTAATAA CGGCTCGGAA GTGGCTTCAC TGGATCCGCA TAAAATCGAA GGCGTGCCCG AGTCCAACAT TGCTCGTGAT CTGCTGGAAG GGCTGTTGAT GGTGACGCCA GACGGTCAGG TTGGGCCTGG CGTAGCGGAA AGCTGGGATA ATAAAGACTA CAAGGTCTGG ACGTTCCATT TGCGTAAAAA TGCCAAATGG TCAAACGGCG ATCCGGTGAC GGCACAAGAT TTCGTCTACA GCTGGCAGCG CATTTCCGAT CCGAAGACCG CCTCGCCTTA TGCCAGTTAC CTGCAATTCG GCCATATCGT GAATATCGAT GATGTGGTTG CCGGCAAAAA ATCCCCCGAT ACATTAGGCC TGAAAGCCAT TGATGACCAC ACGCTGGAAG TCACACTGAG TGAAGCGGTG CCTTATTTCT ATAAGCTGCT GGTGCATCCG TCTACCTATC CGGTCAACAA GAACGTTGTC GAGAAATTCG GCGATAAATG GACCCAACCC GAACACTGGG TCGGTAATGG CGCGTATAAA CTGAAAGAGT GGGTCGTCAA CGAAAAGCTG GTGGTGGAAC GCAACCCGAA TTACTGGGAT AACGCGCATA CGGTGATCAA TCAGGTCACT TTCCTGCCGA TTTCCTCTGA AGTGACGGAT GTTAACCGTT ACCGCAGCGG TGAAATCGAT ATGAGCTATA CCAACCTGCC GATTGAGCTG TTCCAGAAGC TGAAAAAAGA GATCCCGAAT GAAGTTAAGG TCAATCCTTA CCTTTGCACC TACTATTACG AGATCAACAA CCAGAAACCG CCGTTTACCG ATGCGCGAGT CCGTCAGGCT CTGATTCTGG GGTTGGATCA GGATATTTTG ACCAACAAGG TTAAAGGCCA GGGCGATACG CCGGCGTTTG GTTTCACTCC GCCGTATATC GATGGTTTGG ACGGCAAACT GGCCGCGCCG GAGTGGGTAA GCTGGTCGCG TGAAAAACGC AATGCGGAAG CGAAGAAATT GCTGGCTGAA GCGGGTTTCA CCGCAGAGAA ACCGCTGACC CTCAATTTGC TGTACAACAC CTCTGATCTG CACAAGAAAC TGGCGATTGC GGCTTCATCC ATTTGGAAAA ACAATATCGG TGTGGATGTC AAACTGGAAA ACCAGGAGTG GAAAACCTTC CTGGACAGTC GTCATCAGGG AACCTTTGAC ATCGCGCGGG CCGGTTGGTG TGCTGACTAT AACGAGCCGT CAACCTTCCT GAACATCATG ATTTCCGACA GCAGCAGCAA CACTGCGCAC TATAAAAGCC CGGCTTTCGA TCAACTGATG GCCAACGCGT TGGTGGCGAA GACCGATGCC GAACGTTCCG ATGCCTACAA ACAGGCGGAA ACCCTGCTGG AGAAAGAGGG GGCGATCGTT CCGGTTTACT ATTATGCCAA CACCCGTCTG GTGAAACCTT ATGTCGGCGG TTTAACCGGC AAAGATCCGC TGGATAATCT CAAAGATAAA GATCTCTATA TTATCAAGCA TTAA
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Protein sequence | MVTKTIKKRL AMGIVAALTA SAGVNAWAAT VPAGVQLAEK QELVRNNGSE VASLDPHKIE GVPESNIARD LLEGLLMVTP DGQVGPGVAE SWDNKDYKVW TFHLRKNAKW SNGDPVTAQD FVYSWQRISD PKTASPYASY LQFGHIVNID DVVAGKKSPD TLGLKAIDDH TLEVTLSEAV PYFYKLLVHP STYPVNKNVV EKFGDKWTQP EHWVGNGAYK LKEWVVNEKL VVERNPNYWD NAHTVINQVT FLPISSEVTD VNRYRSGEID MSYTNLPIEL FQKLKKEIPN EVKVNPYLCT YYYEINNQKP PFTDARVRQA LILGLDQDIL TNKVKGQGDT PAFGFTPPYI DGLDGKLAAP EWVSWSREKR NAEAKKLLAE AGFTAEKPLT LNLLYNTSDL HKKLAIAASS IWKNNIGVDV KLENQEWKTF LDSRHQGTFD IARAGWCADY NEPSTFLNIM ISDSSSNTAH YKSPAFDQLM ANALVAKTDA ERSDAYKQAE TLLEKEGAIV PVYYYANTRL VKPYVGGLTG KDPLDNLKDK DLYIIKH
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