| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1953 |
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| Symbol | oppB |
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| ID | 8090549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 2319200 |
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| End bp | 2320120 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644836031 |
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| Product | oligopeptide transporter permease |
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| Protein accession | YP_002987565 |
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| Protein GI | 242239384 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAAAAT TTATTTTCCG TCGTTGTCTG GAAGCCATCC CGACGCTGTT TATCCTGATC
ACCATTTCGT TCTTTATGAT GCGTTTGGCG CCGGGAAGCC CGTTTACCGG AGAGCGTACC
CTCCCGCCGG AAGTGCTGGC GAATATTGAA GCTAAGTATC ATCTCAACGA TCCCATGATG
AAACAGTACG GCAACTATCT GGTTCAGTTG CTGCAGGGTG ATTTTGGGCC TTCGTTTAAA
TACAAAGATT ACTCGGTTAA CGAACTGGTA TCCCGGTCGT TTCCGGTCTC CGCCAAACTC
GGGGCTGCCG CGTTTCTGCT GGCGGTGATT CTGGGTGTGA CGTCCGGCGT AGTCGCCGCG
TTGAATCAAA ACAGCAAGTG GGACTATACG GTGATGGGGT TTGCCATGAC CGGCGTGGTG
ATCCCAAGCT TTGTGGTCGC GCCGTTGCTG GTGCTGGTCT TTGCCATTAC GTTGCGCTGG
TTGCCGGGCG GCGGCTGGAA TGGCGGCGCA CCGAAATACA TCATTTTGCC GATGGTGGCG
TTGTCGCTGT CCTATATCGC CAGCATTGCG CGTATTACCC GCGGTTCCAT GATTGAGGTG
CTGCATTCGA ACTTCATTCG CACCGCGCGG GCAAAAGGGC TGCCTCTGCG CCGCATTATT
CTGCGACACG CGCTGAAACC GACGTTGCTG CCTGTACTGT CTTATATGGG GCCCGCATTT
GTCGGCATTA TCACCGGCTC TATGGTGATC GAAACGATTT TTGGCCTGCC CGGTATTGGT
CAATTGTTTG TGAATGGTGC GCTGAACCGT GATTACTCGC TGGTGCTGAG CCTGACTATT
CTGGTCGGGG CGCTGACTAT TCTGTTCAAT GCGGTCGTTG ATGTGTTGTA TGCCGTCATC
GATCCGAAGA TCCGTTACTG A
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| Protein sequence | MLKFIFRRCL EAIPTLFILI TISFFMMRLA PGSPFTGERT LPPEVLANIE AKYHLNDPMM
KQYGNYLVQL LQGDFGPSFK YKDYSVNELV SRSFPVSAKL GAAAFLLAVI LGVTSGVVAA
LNQNSKWDYT VMGFAMTGVV IPSFVVAPLL VLVFAITLRW LPGGGWNGGA PKYIILPMVA
LSLSYIASIA RITRGSMIEV LHSNFIRTAR AKGLPLRRII LRHALKPTLL PVLSYMGPAF
VGIITGSMVI ETIFGLPGIG QLFVNGALNR DYSLVLSLTI LVGALTILFN AVVDVLYAVI
DPKIRY
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