Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1944 |
Symbol | |
ID | 8090540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 2310671 |
End bp | 2311387 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644836022 |
Product | transport protein TonB |
Protein accession | YP_002987556 |
Protein GI | 242239375 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCAAA AAACTTTTTT CCTGACTCGG CGTTATTCAT GGCCATTGCT GGTTTCCGTG GGTATTCACG GTTCGCTGAT TGCCGGGCTG TTATACGCAT CATTCCTGAA TTCTGTACAA ATTCCGGCGG AAACGCCGCC AATGAAGGTG ATGATGGTCA ATGTCGCGCC GGAAGAGGCC GCGCCGGCGC CGCAACCGGT GCCGGAAAAA GTACCCGAGC CGCCGCCGGA GCTGGAGCCG GAGGTTAAGC CGGAACCGCC GCCGTTGCCA AAACCTGTGC CTGTACCACT ACCGGAGCCC AAACCTCAAC CTAAGCCAAA ACCGAAGCCG GTTAAAAAAG TCGAGCCACC CAAAGAAACG CCCCAAACGT CGACACCGGC GCCGACGCAA CCCGTCGTGC AGAATACGGC GCCGGTTCAT CAGGCGCCGC CGCCTAATCC TCAGCCTTCC GGGCCGCGTC CGTTAAGCCG TGCGCAACCG GAGTATCCGG CGCGGGCGTT TGCATTGCGC ATTGAGGGTA AAGTCAGAGT TCAGTTTGAT GTGGATTCGA GCGGTCGCGT TGATAATGTT CAAATTTTGT CTGCCGAACC ACGAAATATG TTCGAACGCG ATATCAAACA GGCGATGCGC AAGTGGCGTT ATGAAGAAAA TAAACCCGCG ACCGGGCTGG TGGTGACGAT CGTTTTCAGA ATCAACGGCG GCGCTGCGAT GGAATAG
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Protein sequence | MPQKTFFLTR RYSWPLLVSV GIHGSLIAGL LYASFLNSVQ IPAETPPMKV MMVNVAPEEA APAPQPVPEK VPEPPPELEP EVKPEPPPLP KPVPVPLPEP KPQPKPKPKP VKKVEPPKET PQTSTPAPTQ PVVQNTAPVH QAPPPNPQPS GPRPLSRAQP EYPARAFALR IEGKVRVQFD VDSSGRVDNV QILSAEPRNM FERDIKQAMR KWRYEENKPA TGLVVTIVFR INGGAAME
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