Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1901 |
Symbol | fumC |
ID | 8090497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 2262989 |
End bp | 2264401 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644835979 |
Product | fumarate hydratase |
Protein accession | YP_002987513 |
Protein GI | 242239332 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.687119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTATAA CTCGAGTGGA AAAAGATTCT ATGGGCGAAG TGTCTGTTCC CGCTGATAGA TTGTGGGGCG CACAAACCCA GCGCTCGCTG GAGCACTTCC GTATTTCTGA AGAGAAAATG CCGGCCGCCC TGATTGCCGC GTTGGCGCGA ACCAAACGGG CGGCCGCGCG TGTTAATTGT GACCTGGGAT TGCTGCCGGC GGATCGGGCC GACGCCATTA TTCATGCCGC TGACGAGGTT TTAGCTGGGG TGCACGGCGC CGAGTTTCCG CTGGCGATCT GGCAAACCGG CTCCGGTACG CAAACCAATA TGAATATGAA TGAAGTGTTG GCCAACCGAG CCAGCGAACT ATTGGGGGGC GTTCGTGGCG GCGACCGGCG GGTTCACCCC AATGACGATG TCAATAAGAG TCAGAGTTCT AATGATGTTT TCCCGACGGC CATGCATGTT GCCGCCGTAT CGGCCGTGCG GGAACATTTG ATTCCGCAAC TGACGGCTTT GCAGCATACG TTGGCCAATA AGGCCGGGCA GTTTCGGCAT ATTGTGAAAA TCGGCCGTAC CCATTTGCAG GATGCCACGC CATTAACCCT GGGGCAGGAA ATATCCGGAT GGTGCGCCAT GTTGGAACAC AGCCTCAGGC ATATCGAAAA CGCGCTTCCC CATTTATGTG AGCTGGCATT AGGAGGAACG GCGGTGGGAA CCGGCCTGAA TACGCATCCG GAATATGCGC GCCGCGTAGC GGAGGCGCTG GCCGAATTGA CGGGGCATCC GTTTGTCTCG GCACCCAATA AGTTTGAAGC GCTGGCGACG TGCGATGCGC TGGTGCAAGG ACATGGCGCG TTGAAGGGGC TGGCCGCTTC ATTGATGAAA ATCGCGAATG ATGTGCGCTG GCTGGCTTCC GGGCCGCGCT GCGGTATCGG CGAGCTGCGT ATTCCGGAAA ATGAACCCGG CAGTTCAATC ATGCCAGGCA AAGTGAATCC GACGCAGTGC GAGGCGTTGA CCATGGTGTG CTGCCAGGTG ATGGGGAATG ATGTCGCGAT CAACATGGGG GGCGCCTCCG GTAATTTTGA GCTCAATGTG TACCGGCCCA TGATTATTCA TAATTTTTTG CAATCAATCC GCCTGCTGGC CGACGGTATG AACAGTTTCA ATGTCCATTG CGCCGTGGGG ATTGAACCGG ATCTGGCGCG TATCGATCAC TTGTTGAACG ATTCCCTGAT GCTGGTGACG GCGCTAAATC CACACATCGG GTACGACAAG GCGGCGGAGA TCGCCAAGCG TGCGCATCAT GAAGGGCTGA CGTTGAAAGC GGCGGCACTG AAACTGGGAT ATTTGACGGA ATCCCAGTTT GATGAATGGG TTAGGCCGGA AAACATGGTC GGCAGCATGA CGCGCGTGGA CAGTAAAGGA TGA
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Protein sequence | MSITRVEKDS MGEVSVPADR LWGAQTQRSL EHFRISEEKM PAALIAALAR TKRAAARVNC DLGLLPADRA DAIIHAADEV LAGVHGAEFP LAIWQTGSGT QTNMNMNEVL ANRASELLGG VRGGDRRVHP NDDVNKSQSS NDVFPTAMHV AAVSAVREHL IPQLTALQHT LANKAGQFRH IVKIGRTHLQ DATPLTLGQE ISGWCAMLEH SLRHIENALP HLCELALGGT AVGTGLNTHP EYARRVAEAL AELTGHPFVS APNKFEALAT CDALVQGHGA LKGLAASLMK IANDVRWLAS GPRCGIGELR IPENEPGSSI MPGKVNPTQC EALTMVCCQV MGNDVAINMG GASGNFELNV YRPMIIHNFL QSIRLLADGM NSFNVHCAVG IEPDLARIDH LLNDSLMLVT ALNPHIGYDK AAEIAKRAHH EGLTLKAAAL KLGYLTESQF DEWVRPENMV GSMTRVDSKG
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