Gene Dd703_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1893 
Symbol 
ID8090489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2255639 
End bp2256388 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content55% 
IMG OID644835972 
Product3-hydroxy acid dehydrogenase 
Protein accessionYP_002987506 
Protein GI242239325 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATTT TAGTCACTGG CGCCACCGCA GGATTTGGCG AGTCGATTAC CCGGAAATTC 
ATCAAGGCCG GACACCAGGT CGTCGCGACC GGGCGCCGTC AGGAACGTCT GGATTCATTG
AAAGCGGAAT TCGGTGAAGC GGTGCATGTG CTGCGTCTGG ATGTCCGCGA TCGCAAGGCG
GTCGAACAGG CGATTGCCGC GCTGCCTGAG GCATGGCGCC ATATTGATGT TTTGGTGAAC
AACGCCGGAT TGGCGCTGGG CCTGGAGCCG GCTCATCGGG CTTCAGTCGA TGATTGGGAA
ACCATGATCG ATACCAATAA CAAAGGGCTG GTGTATATGA CCCACGCTGT ATTGCCCAGC
ATGGTGGCGC GGAATATCGG CCATGTTATC AATATTGGCT CTACGGCGGG CAACTGGCCT
TATGCCGGCG GTAATGTCTA CGGTGCAAGC AAAGCGTTTG TCCGTCAGTT CAGTTTAGGA
TTGCGTACCG ACCTGTTCGG CACCCAGGTA CGGGTCACTA ACATCGAACC GGGACTGGTA
GGAGGCACTG AATTTTCAGC GGTGCGTTTC AAAGGTAATG AAGATAAAGT GCGCCAGACT
TATGACAAAG CCAACCCGCT GACGCCGGAC GACGTGGCGG AAGCCGTATT CTGGGTAGCG
ACGTTGCCCG CGCATGTGAA TATCAATACG CTCGAAATGA TGCCGGTCAA CCAGACCTAT
GCCGGGTTGA AGGTTCATCG CGACGAATGA
 
Protein sequence
MIILVTGATA GFGESITRKF IKAGHQVVAT GRRQERLDSL KAEFGEAVHV LRLDVRDRKA 
VEQAIAALPE AWRHIDVLVN NAGLALGLEP AHRASVDDWE TMIDTNNKGL VYMTHAVLPS
MVARNIGHVI NIGSTAGNWP YAGGNVYGAS KAFVRQFSLG LRTDLFGTQV RVTNIEPGLV
GGTEFSAVRF KGNEDKVRQT YDKANPLTPD DVAEAVFWVA TLPAHVNINT LEMMPVNQTY
AGLKVHRDE