Gene Dd703_1856 details

Gene Information

• Locus tag: Dd703_1856
• Symbol: prfA
• ID: 8090452
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 2207787
• End bp: 2208872
• Gene Length: 1086 bp
• Protein Length: 361 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644835937
• Product: peptide chain release factor 1
• Protein accession: YP_002987471
• Protein GI: 242239290
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.227654
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCCTT CTATTGTTGC CAAACTGGAA GCGTTACAAG AGCGCCATGA AGAAGTACAG 
GCGCTGCTTG GCGATCCCTC GATTATCTCT GATATGGACC GTTTCCGGAT GTTATCCCGC 
GAATATGCCC AGTTGACCGA TATCACGCGC TGTTTTCAGC GCTGGCAACA GGCTCAGGAC 
GATATCGCTA CAGCGGAAAT GTTGCTTGAT GATCCTGAAA TGCGCGAAAT GGCGCAGGAT 
GAGTTGAAGG AAGCCAGAGA AGCGGGGGAT ACGCTCGAGC AGCAGTTGAA AGTCCTGCTG 
TTGCCGCGTG ATCCGGATGA TGAACGCGGC TGCTTCCTGG AGATTCGCGC CGGAACCGGC 
GGTGATGAGG CGGCATTGTT TGCCGGCGAC TTGTTCCGCA TGTACAGCCG TTATGCTGAA 
TCGCGTCGCT GGCGGGTTGA GATGGTAAGC GCCAGCGATG GCGAGCATGG CGGTTATAAA 
GAGGTGATCG CCAAAGTGAT CGGCGAAGGC GCCTACGGGC AGCTCAAATT TGAATCCGGC 
GGGCATCGGG TGCAGCGTGT TCCGGCGACG GAATCTCAGG GGCGCATCCA TACGTCGGCC 
TGTACCGTGG CGGTCATGCC GGAAGTGCCG GAGGCTGAAC TGCCGGATAT CAACCCTGTG 
GATCTGCGCA TCGATACCTT CCGTTCTTCT GGCGCGGGTG GGCAGCATGT CAACACGACC 
GACTCCGCCA TCCGTATTAC CCACTTGCCC ACCGGCATTG TGGTGGAGTG CCAGGACGAG 
CGTTCACAGC ATAAAAACAA AGCCAAGGCG CTCTCGGTGC TGGCAGCGCG TATTCGTGCG 
GCGGAAATGC AAAAGCGTCA GCAGGAAGAG GCCTCGACGC GGCGTAACCT GTTGGGCAGC 
GGCGATCGAT CCGACCGTAT CCGTACCTAT AACTTTCCGC AGGGAAGAGT AACCGATCAT 
CGTATCAACC TGACGCTTTA TCGTCTGGAT GAAGCGATTG AAGGCAAACT GGATATGCTG 
ATTCAGCCGA TCGTTCAGGA GTATCAGGCT GACCAACTGG CGGCGTTGGC CGAACAGGAT 
CAATGA 

 

Protein sequence

MKPSIVAKLE ALQERHEEVQ ALLGDPSIIS DMDRFRMLSR EYAQLTDITR CFQRWQQAQD 
DIATAEMLLD DPEMREMAQD ELKEAREAGD TLEQQLKVLL LPRDPDDERG CFLEIRAGTG 
GDEAALFAGD LFRMYSRYAE SRRWRVEMVS ASDGEHGGYK EVIAKVIGEG AYGQLKFESG 
GHRVQRVPAT ESQGRIHTSA CTVAVMPEVP EAELPDINPV DLRIDTFRSS GAGGQHVNTT 
DSAIRITHLP TGIVVECQDE RSQHKNKAKA LSVLAARIRA AEMQKRQQEE ASTRRNLLGS 
GDRSDRIRTY NFPQGRVTDH RINLTLYRLD EAIEGKLDML IQPIVQEYQA DQLAALAEQD 
Q