Gene Dd703_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1838 
Symbol 
ID8090434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2188218 
End bp2189888 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content63% 
IMG OID644835921 
ProductABC transporter related 
Protein accessionYP_002987455 
Protein GI242239274 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCCG TGTTTGCTCT CGATTCCGAC CCGCAATTAA CGCCGATCGC CGATCCGGCG 
CTATTGACGA TTGATCGCTT GCGCGTGGCG CTGCCGGCTG GCGGCGATCG CGCCGACGCG
ATAGAAGACT TGTCCCTGAC CCTGCATCCA GGGCAAACCC TGTGTGTGGT GGGGGAATCC
GGCTCCGGCA AATCGGTGCT GGCCATGACA TTGATGGGCC TGTTGGCCGG TGAACTGACC
GTGCGGCATG GCACGGTGCG GCTGGGGGAC ACCCTGTTGC TGAATCAAGG GCGGTATGCG
GCGCCGGCGG TGCTCAAAGC GTTGCGCGGC GCGCAGATCG GTATGGTGTT TCAGGAGCCG
ATGACCGCGC TTAACCCGGT GGTGATTTGC GGGAAGCAGA TGGATGAAAT GTTGCGCGCA
CACAGCCGGA TGTCGCGGGA TGAGCGCAAA GCGGCGATTC TGGCGATATT CGCCCGGGTA
CAATTGCCGG ATCCCGAACG TATCTACCAC AGCTATCCGC ACCAGCTCTC CGGCGGCCAG
CGGCAACGCA TCGTGATCGC CATGGCGGTG ATTTTGCGCC CGCGTCTGCT GATTTGCGAT
GAGCCGACGA CGGCGCTGGA TGTCACCACC CAACGGGAAA TCCTCAGCCT GATCCGTGAG
TTACAACAAG AAAATGGCTG TGCGGTGTTG TTCATCACGC ACGATATGGG GGTGGTGGCG
GAGATTGCCG ATGACGTGCT GGTGATGCAC TTAGGCGCCG TCGTGGAGCA GGGGGCGGCG
GCACAGGTTC TGCGGCAGCC ATCCCAGGCG TATACCCGGA TGCTGCTCGA TTGCGTGCCT
GACGGCGTAC CGTGCCGCAG CGGCGACAAG CAGCGCGGCA CGCCGCTGCT GAATGCTGAC
GCGGTGGTGA AAAACTATGT CCGTCGTACT TTTCTCGGCC GTCGTCAGAC CGTGGCCGCC
CTGCGTGACG CCAGCCTGGC GGTGCACTAC GGCGAGACCG TGGGCATCGT CGGCGAGTCC
GGCTCGGGCA AATCCACCTT CGCCCGCTGT CTGATGCGGC TCATCGACCC GTCATCCGGC
GTGATCCAGT GGGGGGAAAA GGCGGTGCAA TCGCTGCCGG AACGCCAGTT ATGGTCGCTG
CGCTCGCAAG TTCAGATGGT GTTTCAGGAT CCCAATCGCT CGTTTAACCC ACGGCGTACC
GTGGGCTCGT CGATCCGCGA GGGCGCCATG AATTTCGGCC TGAGCCGCGA GAGCGCGCAG
GCGCTGGCCG AGACGTTGAT GGATCGCATC CGCTTGCCGC GCGAGTCGCT GTCGCGCTAT
CCGCATCAAT TCTCCGGCGG TCAGCGCCAG CGGTTGGCCA TCGCCCGCGC GTTGGCGTGT
AAGCCGCGCG TGCTGGTGGC CGACGAAGCG GTGTCGGCGT TGGATGTATC GGTGCAGCAA
CAGATTCTGG CGCTGCTGGA AGAGATTCAG CGCGATCTGG GGCTGGGGAT GATCTTCGTC
ACCCACGACC TGCGCGTCGC TGCCCGGTTG TGCGATCGGC TGATCGTGAT GCAGCAGGGC
GCCATTATCG AACAAGGGCC GACCGCGCAG CTGTTTGCGG CGCCGCAGCA GGCTTATACC
CGCAGTTTGC TACAGGCGAT GCCGCGTTGG GTTACGCCAT CGAGGGCATG A
 
Protein sequence
MSAVFALDSD PQLTPIADPA LLTIDRLRVA LPAGGDRADA IEDLSLTLHP GQTLCVVGES 
GSGKSVLAMT LMGLLAGELT VRHGTVRLGD TLLLNQGRYA APAVLKALRG AQIGMVFQEP
MTALNPVVIC GKQMDEMLRA HSRMSRDERK AAILAIFARV QLPDPERIYH SYPHQLSGGQ
RQRIVIAMAV ILRPRLLICD EPTTALDVTT QREILSLIRE LQQENGCAVL FITHDMGVVA
EIADDVLVMH LGAVVEQGAA AQVLRQPSQA YTRMLLDCVP DGVPCRSGDK QRGTPLLNAD
AVVKNYVRRT FLGRRQTVAA LRDASLAVHY GETVGIVGES GSGKSTFARC LMRLIDPSSG
VIQWGEKAVQ SLPERQLWSL RSQVQMVFQD PNRSFNPRRT VGSSIREGAM NFGLSRESAQ
ALAETLMDRI RLPRESLSRY PHQFSGGQRQ RLAIARALAC KPRVLVADEA VSALDVSVQQ
QILALLEEIQ RDLGLGMIFV THDLRVAARL CDRLIVMQQG AIIEQGPTAQ LFAAPQQAYT
RSLLQAMPRW VTPSRA