| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1833 |
|---|
| Symbol | |
|---|
| ID | 8090429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 2182227 |
|---|
| End bp | 2183030 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644835916 |
|---|
| Product | pyrroline-5-carboxylate reductase |
|---|
| Protein accession | YP_002987450 |
|---|
| Protein GI | 242239269 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
|---|
| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.213936 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCATA TTCATTTTAT CGGCGCCGGC CAGATGGCCG AAGCCATTAT CCGCGCGGCT
ATTCGTCGTC AGGCCGTCAG CGCCGGCGAG ATCACGCTGT CTGATATCGA CCCGCAACGT
GTCCTGACGT TGCGCGAGCG TTACCAGCTA ACCAACCCGC TCAGCGAGCA TGGGGCGATA
GCGGGTGCGG ATTACATCGT GATGGGGGTA CGCCCGCAGG ATGACATCGC GGCGGTTGCC
GAGACGATCA ACCGGTACGC TGCACCGCAG GCGACGGTGA TTTCGATCAT CGCGGGCGTC
ACGCTGGCGC AGCTCGCGTC CCTGCTGGGG GCGGAACGGC CCATCGTGCG CACCATCCCC
AATACCCTGA CCGATACCGG CCTGGGTTAC AGCGGCGTGG TATGCAATGC GCAGGCCAAG
ATCGAACCGT TGCGACCGTT CCTCGAAAGT TTCGGCAAGG TGATGATGTT GGAGGAGCGG
CTGATCGATG TCTTTACCGG TTATGCGGTG GCCGGCGTGA ATTATGTGTA TTACTTCATT
GAGTCGCTGG CGGATGCGGG TGTGTTGGCC GGGTTGCCTC GTCAACAGGC GACGCAGGTG
GCGTGGGAAA ATCTGGTGGG CGCGGTGGAG ATGCTGAAAG CCAGCGGCTG CCATCCGCGC
CAGCTGATGG ATATCAATAA CTCCCCGGCC GGGGTGGGGA TTAACGGCCT GTACGAGCTG
AATAACAGCG ACTTCGCCGC GGGTTTGCAG CGCAGCGTTA TGGCGGCAGT ACGGCGAACC
ACCGCGTTGT CTTCCGGCCG CTGA
|
|---|
| Protein sequence | MSHIHFIGAG QMAEAIIRAA IRRQAVSAGE ITLSDIDPQR VLTLRERYQL TNPLSEHGAI
AGADYIVMGV RPQDDIAAVA ETINRYAAPQ ATVISIIAGV TLAQLASLLG AERPIVRTIP
NTLTDTGLGY SGVVCNAQAK IEPLRPFLES FGKVMMLEER LIDVFTGYAV AGVNYVYYFI
ESLADAGVLA GLPRQQATQV AWENLVGAVE MLKASGCHPR QLMDINNSPA GVGINGLYEL
NNSDFAAGLQ RSVMAAVRRT TALSSGR
|
|---|
| |