| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1811 |
|---|
| Symbol | |
|---|
| ID | 8090407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 2158273 |
|---|
| End bp | 2159052 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644835895 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002987429 |
|---|
| Protein GI | 242239248 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.930185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTGG GCATTGCGGG TAAACAGGCG CTGGTCTGGG GCGGCAGCCG AGGGCTGGGC
AAAGCCGTTG GCCGCCAACT GGCGCAGGAA GGCGTGCAGG TGACGCTGTT GGCGCGCACC
GCGGACGTGC TGCGCCAGGC GCAGGATGAA ATAGAACAGG CGATCGGCGT GCGCCCGCGG
GCGGTGGTGG CGGACATCAC CCGCGATGAA GGACGACGGG CGGCACTGGC GGCTTGTCCG
CAGCCGGACA TTGTGATCAA CAACGCCAGC GGTCCCGCGC CGGGCGATTT TCGCGACTGG
ACACGCCAGC ATTGGCTGGA CGCGCTCGAC GGCATGATGC TTGGCCCGAT CGAAATGATG
CGGTTGACGG TGGACGGCAT GCGCCAGCGT GGTTTCGGGC GCATCGTCAA CATCACCTCC
CGTAGCGTGA AGATCCCACA GTTGGAGCTG GGGCTGTCGA ACAGCGCCCG CTCGGGGTTG
ACCGGCTTTG TCGCCGGGCT GTCCCGCACG GTGGTGCGTG ACAATGTCAC CATTAACAAC
CTGCTGCCGG GCATCTTCGA TACCGACGGC CAGTGGCAGC ACATTCAGTC GCTGGTGGCG
CAGACCGGCA AATCCTATCA GCAACTGCAC CAGGCGCGGG CGGCGGCCAA CCCGGCCGGG
CGCTATGGGC AGCCGGAGGA GTTCGGCGCC GCCTGTGCGT TCCTGTGCTC GCGGCAGGCG
GCGTTCATCA CCGGGCAGAA TTGGCTGATC GACGGCGGCA GTTATCCGGG CACGTTTTAA
|
|---|
| Protein sequence | MDLGIAGKQA LVWGGSRGLG KAVGRQLAQE GVQVTLLART ADVLRQAQDE IEQAIGVRPR
AVVADITRDE GRRAALAACP QPDIVINNAS GPAPGDFRDW TRQHWLDALD GMMLGPIEMM
RLTVDGMRQR GFGRIVNITS RSVKIPQLEL GLSNSARSGL TGFVAGLSRT VVRDNVTINN
LLPGIFDTDG QWQHIQSLVA QTGKSYQQLH QARAAANPAG RYGQPEEFGA ACAFLCSRQA
AFITGQNWLI DGGSYPGTF
|
|---|
| |